Crystal structure of H.pylori NikR in complex with DNA
Pozharski, E., de Serrano, V.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Nickel-responsive regulator | 148 | Helicobacter pylori 26695 | Mutation(s): 0  Gene Names: HP_1338 | ||
UniProt | |||||
Find proteins for O25896 (Helicobacter pylori (strain ATCC 700392 / 26695)) Explore O25896  Go to UniProtKB:  O25896 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O25896 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (36-MER) | E [auth L] | 36 | synthetic construct | ||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Length | Organism | Image | |
DNA (36-MER) | F [auth M] | 36 | synthetic construct | ||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NI (Subject of Investigation/LOI) Query on NI | G [auth A], I [auth A], J [auth B], K [auth B] | NICKEL (II) ION Ni VEQPNABPJHWNSG-UHFFFAOYSA-N | |||
MG (Subject of Investigation/LOI) Query on MG | H [auth A], L [auth C] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 72.37 | α = 90 |
b = 94.18 | β = 90 |
c = 204.06 | γ = 90 |
Software Name | Purpose |
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BUSTER | refinement |
XDS | data reduction |
Aimless | data scaling |
PHASER | phasing |