6H73

Molybdenum storage protein - recombinantly produced and loaded with molybdate under in vitro conditions


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.233 
  • R-Value Work: 0.211 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

The molybdenum storage protein - A bionanolab for creating experimentally alterable polyoxomolybdate clusters.

Brunle, S.Poppe, J.Hail, R.Demmer, U.Ermler, U.

(2018) J. Inorg. Biochem. 189: 172-179


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Molybdenum storage protein subunit beta
B
269Azotobacter vinelandii (strain DJ / ATCC BAA-1303)Mutation(s): 0 
Gene Names: mosB
Find proteins for P84253 (Azotobacter vinelandii (strain DJ / ATCC BAA-1303))
Go to UniProtKB:  P84253
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Molybdenum storage protein subunit alpha
A
275Azotobacter vinelandii (strain DJ / ATCC BAA-1303)Mutation(s): 0 
Gene Names: mosA
Find proteins for P84308 (Azotobacter vinelandii (strain DJ / ATCC BAA-1303))
Go to UniProtKB:  P84308
Small Molecules
Ligands 6 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ATP
Query on ATP

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Download CCD File 
A, B
ADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
 Ligand Interaction
PO4
Query on PO4

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A, B
PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
 Ligand Interaction
MOO
Query on MOO

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A
MOLYBDATE ION
MOLYBDATE
Mo O4
MEFBJEMVZONFCJ-UHFFFAOYSA-N
 Ligand Interaction
MG
Query on MG

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Download CCD File 
A
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
FUQ
Query on FUQ

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Download CCD File 
A
Mo5 Cluster
H20 Mo5 O25
KKTGFJKWMBVMER-UHFFFAOYSA-A
 Ligand Interaction
GUH
Query on GUH

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Download CCD File 
A
Mo6 cluster
H20 Mo6 O26
BRWUKIRZWYQFIE-UHFFFAOYSA-A
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.233 
  • R-Value Work: 0.211 
  • Space Group: P 63 2 2
Unit Cell:
Length (Å)Angle (°)
a = 115.190α = 90.00
b = 115.190β = 90.00
c = 233.060γ = 120.00
Software Package:
Software NamePurpose
PHENIXrefinement
XSCALEdata scaling
PHENIXphasing
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2018-11-14
    Type: Initial release
  • Version 1.1: 2019-03-06
    Type: Data collection