6GG7

cyanobacterial GAPDH with full-length CP12


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.32 Å
  • R-Value Free: 0.173 
  • R-Value Work: 0.145 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

cyanobacterial GAPDH with full-length CP12

McFarlane, C.R.Shah, N.Bubeck, D.Murray, J.W.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Glyceraldehyde-3-phosphate dehydrogenase
B, A
339Thermosynechococcus elongatus (strain BP-1)Mutation(s): 0 
EC: 1.2.1.-
Find proteins for Q8DIW5 (Thermosynechococcus elongatus (strain BP-1))
Go to UniProtKB:  Q8DIW5
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
CP12 polypeptide
C, D
77Thermosynechococcus elongatus (strain BP-1)Mutation(s): 0 
Gene Names: cp12
Find proteins for Q8DHX3 (Thermosynechococcus elongatus (strain BP-1))
Go to UniProtKB:  Q8DHX3
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NAD
Query on NAD

Download SDF File 
Download CCD File 
A, B
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
C21 H27 N7 O14 P2
BAWFJGJZGIEFAR-NNYOXOHSSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.32 Å
  • R-Value Free: 0.173 
  • R-Value Work: 0.145 
  • Space Group: P 43 21 2
Unit Cell:
Length (Å)Angle (°)
a = 141.052α = 90.00
b = 141.052β = 90.00
c = 75.931γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
PHENIXrefinement
xia2data scaling
xia2data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Biotechnology and Biological Sciences Research CouncilUnited KingdomBB/J014575/1

Revision History 

  • Version 1.0: 2019-05-08
    Type: Initial release