6FF1 | pdb_00006ff1

CsoZ metallochaperone

PDB DOI: https://doi.org/10.2210/pdb6FF1/pdb

Classification: CHAPERONE
Organism(s): Staphylococcus aureus subsp. aureus NCTC 8325
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2018-01-03 Released: 2019-01-30
Deposition Author(s): Pelicioli-Riboldi, G., Basle, A., Waldron, K.
Funding Organization(s): Sir Henry Dale Welcome and the Royal Society, CAPES Science without borders scholarship

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.30 Å
R-Value Free:
0.172 (Depositor), 0.180 (DCC)
R-Value Work:
0.142 (Depositor), 0.150 (DCC)
R-Value Observed:
0.144 (Depositor)

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

The copper homeostasis system of Staphylococcus aureus: Two putative metallochaperones with contrasting copper binding properties.

Pelicioli-Riboldi, G., Tarrant, E., Basle, A., Davies, O., Waldron, K.

To be published.

Macromolecule Content

Total Structure Weight: 7.89 kDa
Atom Count: 685
Modeled Residue Count: 69
Deposited Residue Count: 69
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
CsoZ	A	69	Staphylococcus aureus subsp. aureus NCTC 8325	Mutation(s): 0 Gene Names: SAOUHSC_02321
UniProt
Find proteins for Q2FWH0 (Staphylococcus aureus (strain NCTC 8325 / PS 47)) Explore Q2FWH0 Go to UniProtKB: Q2FWH0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q2FWH0
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
CA Query on CA Download Ideal Coordinates CCD File SDF format, chain B [auth A] MOL2 format, chain B [auth A] mmCIF format, chain B [auth A]	B [auth A]	CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N		Interactions Focus chain B [auth A] Interactions & Density Focus chain B [auth A]

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.30 Å
R-Value Free: 0.172 (Depositor), 0.180 (DCC)
R-Value Work: 0.142 (Depositor), 0.150 (DCC)
R-Value Observed: 0.144 (Depositor)

Space Group: P 3₁ 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 51.048	α = 90
b = 51.048	β = 90
c = 64.955	γ = 120

Software Package:

Software Name	Purpose
GDA	data collection
XDS	data reduction
Aimless	data scaling
SHELXCD	phasing
BUCCANEER	model building
ARP/wARP	model building
REFMAC	refinement
Coot	model building
MolProbity	model building

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2019-01-30

Deposition Author(s):

Pelicioli-Riboldi, G.

Funding Organization	Location	Grant Number
Sir Henry Dale Welcome and the Royal Society	United Kingdom	098375/Z/12/Z
CAPES Science without borders scholarship	Brazil	BEX 2445/13-1

Revision History (Full details and data files)

Version 1.0: 2019-01-30
Type: Initial release
Version 1.1: 2024-05-08
Changes: Data collection, Database references, Derived calculations

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.