6BZ7

Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.68 Å
  • R-Value Free: 0.274 
  • R-Value Work: 0.228 
  • R-Value Observed: 0.230 

Starting Model: experimental
View more details

wwPDB Validation   3D Report Full Report


This is version 1.5 of the entry. See complete history


Literature

Ribosomal ambiguity (ram) mutations promote the open (off) to closed (on) transition and thereby increase miscoding.

Hoffer, E.D.Maehigashi, T.Fredrick, K.Dunham, C.M.

(2019) Nucleic Acids Res 47: 1557-1563

  • DOI: https://doi.org/10.1093/nar/gky1178
  • Primary Citation of Related Structures:  
    6BUW, 6BZ6, 6BZ7, 6BZ8

  • PubMed Abstract: 

    Decoding is thought to be governed by a conformational transition in the ribosome-open (off) to closed (on)-that occurs upon codon-anticodon pairing in the A site. Ribosomal ambiguity (ram) mutations increase miscoding and map to disparate regions, consistent with a role for ribosome dynamics in decoding, yet precisely how these mutations act has been unclear. Here, we solved crystal structures of 70S ribosomes harboring 16S ram mutations G299A and G347U in the absence A-site tRNA (A-tRNA) and in the presence of a near-cognate anticodon stem-loop (ASL). In the absence of an A-tRNA, each of the mutant ribosomes exhibits a partially closed (on) state. In the 70S-G347U structure, the 30S shoulder is rotated inward and intersubunit bridge B8 is disrupted. In the 70S-G299A structure, the 30S shoulder is rotated inward and decoding nucleotide G530 flips into the anti conformation. Both of these mutant ribosomes adopt the fully closed (on) conformation in the presence of near-cognate A-tRNA, just as they do with cognate A-tRNA. Thus, these ram mutations act by promoting the open (off) to closed (on) transition, albeit in somewhat distinct ways. This work reveals the functional importance of 30S shoulder rotation for productive aminoacylated-tRNA incorporation.


  • Organizational Affiliation

    Department of Biochemistry and Emory Antibiotic Resistance Center, Emory University School of Medicine, Atlanta, GA 30322, USA.


Macromolecules

Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S2B [auth QB],
FB [auth XB]
256Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P80371 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P80371 
Go to UniProtKB:  P80371
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP80371
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S3C [auth QC],
GB [auth XC]
239Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P80372 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P80372 
Go to UniProtKB:  P80372
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP80372
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S4D [auth QD],
HB [auth XD]
209Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P80373 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P80373 
Go to UniProtKB:  P80373
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP80373
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S5E [auth QE],
IB [auth XE]
162Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SHQ5 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SHQ5 
Go to UniProtKB:  Q5SHQ5
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SHQ5
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S6F [auth QF],
JB [auth XF]
101Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SLP8 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SLP8 
Go to UniProtKB:  Q5SLP8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SLP8
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S7G [auth QG],
KB [auth XG]
156Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P17291 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P17291 
Go to UniProtKB:  P17291
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP17291
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S8H [auth QH],
LB [auth XH]
138Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P0DOY9 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P0DOY9 
Go to UniProtKB:  P0DOY9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP0DOY9
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S9I [auth QI],
MB [auth XI]
128Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P80374 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P80374 
Go to UniProtKB:  P80374
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP80374
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S10J [auth QJ],
NB [auth XJ]
105Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SHN7 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SHN7 
Go to UniProtKB:  Q5SHN7
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SHN7
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S11K [auth QK],
OB [auth XK]
129Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P80376 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P80376 
Go to UniProtKB:  P80376
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP80376
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S12L [auth QL],
PB [auth XL]
132Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SHN3 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SHN3 
Go to UniProtKB:  Q5SHN3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SHN3
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S13M [auth QM],
QB [auth XM]
126Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P80377 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P80377 
Go to UniProtKB:  P80377
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP80377
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S14 type ZN [auth QN],
RB [auth XN]
61Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P0DOY6 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P0DOY6 
Go to UniProtKB:  P0DOY6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP0DOY6
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S15O [auth QO],
SB [auth XO]
89Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SJ76 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SJ76 
Go to UniProtKB:  Q5SJ76
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SJ76
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S16P [auth QP],
TB [auth XP]
88Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SJH3 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SJH3 
Go to UniProtKB:  Q5SJH3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SJH3
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S17Q [auth QQ],
UB [auth XQ]
105Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P0DOY7 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P0DOY7 
Go to UniProtKB:  P0DOY7
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP0DOY7
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S18R [auth QR],
VB [auth XR]
88Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SLQ0 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SLQ0 
Go to UniProtKB:  Q5SLQ0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SLQ0
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S19S [auth QS],
WB [auth XS]
93Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SHP2 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SHP2 
Go to UniProtKB:  Q5SHP2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SHP2
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S20T [auth QT],
XB [auth XT]
106Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P80380 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P80380 
Go to UniProtKB:  P80380
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP80380
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 21
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein ThxU [auth QU],
YB [auth XU]
27Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SIH3 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SIH3 
Go to UniProtKB:  Q5SIH3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SIH3
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 27
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L2BA [auth RD],
FC [auth YD]
276Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P60405 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P60405 
Go to UniProtKB:  P60405
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP60405
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 28
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L3CA [auth RE],
GC [auth YE]
206Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SHN8 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SHN8 
Go to UniProtKB:  Q5SHN8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SHN8
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 29
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L4DA [auth RF],
HC [auth YF]
210Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SHN9 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SHN9 
Go to UniProtKB:  Q5SHN9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SHN9
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 30
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L5EA [auth RG],
IC [auth YG]
182Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SHQ0 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SHQ0 
Go to UniProtKB:  Q5SHQ0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SHQ0
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 31
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L6FA [auth RH],
JC [auth YH]
180Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P0DOY8 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P0DOY8 
Go to UniProtKB:  P0DOY8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP0DOY8
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 32
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L9GA [auth RI],
KC [auth YI]
148Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SLQ1 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SLQ1 
Go to UniProtKB:  Q5SLQ1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SLQ1
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 33
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L13HA [auth RN],
LC [auth YN]
140Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P60488 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P60488 
Go to UniProtKB:  P60488
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP60488
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 34
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L14IA [auth RO],
MC [auth YO]
122Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SHP8 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SHP8 
Go to UniProtKB:  Q5SHP8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SHP8
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 35
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L15JA [auth RP],
NC [auth YP]
150Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SHQ7 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SHQ7 
Go to UniProtKB:  Q5SHQ7
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SHQ7
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 36
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L16KA [auth RQ],
OC [auth YQ]
141Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P60489 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P60489 
Go to UniProtKB:  P60489
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP60489
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 37
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L17LA [auth RR],
PC [auth YR]
118Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q9Z9H5 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q9Z9H5 
Go to UniProtKB:  Q9Z9H5
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9Z9H5
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 38
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L18MA [auth RS],
QC [auth YS]
112Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SHQ4 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SHQ4 
Go to UniProtKB:  Q5SHQ4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SHQ4
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 39
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L19NA [auth RT],
RC [auth YT]
146Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P60490 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P60490 
Go to UniProtKB:  P60490
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP60490
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 40
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L20OA [auth RU],
SC [auth YU]
118Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P60491 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P60491 
Go to UniProtKB:  P60491
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP60491
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 41
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L21PA [auth RV],
TC [auth YV]
101Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P60492 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P60492 
Go to UniProtKB:  P60492
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP60492
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 42
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L22QA [auth RW],
UC [auth YW]
113Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SHP3 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SHP3 
Go to UniProtKB:  Q5SHP3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SHP3
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 43
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L23RA [auth RX],
VC [auth YX]
96Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SHP0 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SHP0 
Go to UniProtKB:  Q5SHP0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SHP0
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 44
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L24SA [auth RY],
WC [auth YY]
110Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SHP9 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SHP9 
Go to UniProtKB:  Q5SHP9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SHP9
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 45
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L25TA [auth RZ],
XC [auth YZ]
206Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SHZ1 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SHZ1 
Go to UniProtKB:  Q5SHZ1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SHZ1
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 46
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L27UA [auth R0],
YC [auth Y0]
85Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P60493 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P60493 
Go to UniProtKB:  P60493
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP60493
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 47
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L28VA [auth R1],
ZC [auth Y1]
98Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P60494 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P60494 
Go to UniProtKB:  P60494
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP60494
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 48
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L29AD [auth Y2],
WA [auth R2]
72Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SHP6 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SHP6 
Go to UniProtKB:  Q5SHP6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SHP6
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 49
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L30BD [auth Y3],
XA [auth R3]
60Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SHQ6 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SHQ6 
Go to UniProtKB:  Q5SHQ6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SHQ6
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 50
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L31CD [auth Y4],
YA [auth R4]
71Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SJE1 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SJE1 
Go to UniProtKB:  Q5SJE1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SJE1
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 51
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L32DD [auth Y5],
ZA [auth R5]
60Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P80339 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P80339 
Go to UniProtKB:  P80339
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP80339
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 52
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L33AB [auth R6],
ED [auth Y6]
54Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P35871 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P35871 
Go to UniProtKB:  P35871
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP35871
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 53
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L34BB [auth R7],
FD [auth Y7]
49Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for P80340 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore P80340 
Go to UniProtKB:  P80340
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP80340
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 54
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L35CB [auth R8],
GD [auth Y8]
65Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SKU1 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SKU1 
Go to UniProtKB:  Q5SKU1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SKU1
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 55
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L36DB [auth R9],
HD [auth Y9]
37Thermus thermophilus HB8Mutation(s): 0 
UniProt
Find proteins for Q5SHR2 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8))
Explore Q5SHR2 
Go to UniProtKB:  Q5SHR2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ5SHR2
Sequence Annotations
Expand
  • Reference Sequence
Find similar nucleic acids by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains LengthOrganismImage
16S rRNAA [auth QA],
EB [auth XA]
1,508Thermus thermophilus HB8
Sequence Annotations
Expand
  • Reference Sequence
Find similar nucleic acids by:  (by identity cutoff)  |  3D Structure
Entity ID: 22
MoleculeChains LengthOrganismImage
tRNA fMetAC [auth XW],
V [auth QV],
W [auth QW],
ZB [auth XV]
77Escherichia coli
Sequence Annotations
Expand
  • Reference Sequence

Find similar nucleic acids by:  Sequence   |   3D Structure  

Entity ID: 23
MoleculeChains LengthOrganismImage
messenger RNABC [auth XX],
X [auth QX]
25Escherichia coli
Sequence Annotations
Expand
  • Reference Sequence

Find similar nucleic acids by:  Sequence   |   3D Structure  

Entity ID: 24
MoleculeChains LengthOrganismImage
ASL LeuCC [auth XY],
Y [auth QY]
17Escherichia coli
Sequence Annotations
Expand
  • Reference Sequence
Find similar nucleic acids by:  (by identity cutoff)  |  3D Structure
Entity ID: 25
MoleculeChains LengthOrganismImage
23S rRNADC [auth YA],
Z [auth RA]
2,915Thermus thermophilus HB8
Sequence Annotations
Expand
  • Reference Sequence
Find similar nucleic acids by:  (by identity cutoff)  |  3D Structure
Entity ID: 26
MoleculeChains LengthOrganismImage
5S rRNAAA [auth RB],
EC [auth YB]
122Thermus thermophilus HB8
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
SF4
Query on SF4

Download Ideal Coordinates CCD File 
NEA [auth XD],
ZF [auth QD]
IRON/SULFUR CLUSTER
Fe4 S4
LJBDFODJNLIPKO-UHFFFAOYSA-N
ZN
Query on ZN

Download Ideal Coordinates CCD File 
ABB [auth YY]
CBB [auth Y4]
DBA [auth R4]
DBB [auth Y5]
DG [auth QN]
ABB [auth YY],
CBB [auth Y4],
DBA [auth R4],
DBB [auth Y5],
DG [auth QN],
EBA [auth R5],
EBB [auth Y6],
FBA [auth R6],
IBA [auth R9],
IBB [auth Y9],
REA [auth XN],
VAA [auth RY]
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
MG
Query on MG

Download Ideal Coordinates CCD File 
AAA [auth RB]
AAB [auth YB]
ABA [auth R1]
ACA [auth XA]
ADA [auth XA]
AAA [auth RB],
AAB [auth YB],
ABA [auth R1],
ACA [auth XA],
ADA [auth XA],
AE [auth QA],
AEA [auth XA],
AF [auth QA],
AFA [auth YA],
AG [auth QE],
AGA [auth YA],
AH [auth RA],
AHA [auth YA],
AI [auth RA],
AIA [auth YA],
AJ [auth RA],
AJA [auth YA],
AK [auth RA],
AKA [auth YA],
AL [auth RA],
ALA [auth YA],
AM [auth RA],
AMA [auth YA],
AN [auth RA],
ANA [auth YA],
AO [auth RA],
AOA [auth YA],
AP [auth RA],
APA [auth YA],
AQ [auth RA],
AQA [auth YA],
AR [auth RA],
ARA [auth YA],
AS [auth RA],
ASA [auth YA],
AT [auth RA],
ATA [auth YA],
AU [auth RA],
AUA [auth YA],
AV [auth RA],
AVA [auth YA],
AW [auth RA],
AWA [auth YA],
AX [auth RA],
AXA [auth YA],
AY [auth RA],
AYA [auth YA],
AZ [auth RA],
AZA [auth YA],
BAA [auth RB],
BAB [auth YB],
BBA [auth R1],
BBB [auth Y0],
BCA [auth XA],
BDA [auth XA],
BE [auth QA],
BEA [auth XA],
BF [auth QA],
BFA [auth YA],
BG [auth QF],
BGA [auth YA],
BH [auth RA],
BHA [auth YA],
BI [auth RA],
BIA [auth YA],
BJ [auth RA],
BJA [auth YA],
BK [auth RA],
BKA [auth YA],
BL [auth RA],
BLA [auth YA],
BM [auth RA],
BMA [auth YA],
BN [auth RA],
BNA [auth YA],
BO [auth RA],
BOA [auth YA],
BP [auth RA],
BPA [auth YA],
BQ [auth RA],
BQA [auth YA],
BR [auth RA],
BRA [auth YA],
BS [auth RA],
BSA [auth YA],
BT [auth RA],
BTA [auth YA],
BU [auth RA],
BUA [auth YA],
BV [auth RA],
BVA [auth YA],
BW [auth RA],
BWA [auth YA],
BX [auth RA],
BXA [auth YA],
BY [auth RA],
BYA [auth YA],
BZ [auth RA],
BZA [auth YA],
CAA [auth RB],
CAB [auth YB],
CBA [auth R4],
CCA [auth XA],
CDA [auth XA],
CE [auth QA],
CEA [auth XA],
CF [auth QA],
CFA [auth YA],
CG [auth QH],
CGA [auth YA],
CH [auth RA],
CHA [auth YA],
CI [auth RA],
CIA [auth YA],
CJ [auth RA],
CJA [auth YA],
CK [auth RA],
CKA [auth YA],
CL [auth RA],
CLA [auth YA],
CM [auth RA],
CMA [auth YA],
CN [auth RA],
CNA [auth YA],
CO [auth RA],
COA [auth YA],
CP [auth RA],
CPA [auth YA],
CQ [auth RA],
CQA [auth YA],
CR [auth RA],
CRA [auth YA],
CS [auth RA],
CSA [auth YA],
CT [auth RA],
CTA [auth YA],
CU [auth RA],
CUA [auth YA],
CV [auth RA],
CVA [auth YA],
CW [auth RA],
CWA [auth YA],
CX [auth RA],
CXA [auth YA],
CY [auth RA],
CYA [auth YA],
CZ [auth RA],
CZA [auth YA],
DAA [auth RB],
DAB [auth YB],
DCA [auth XA],
DDA [auth XA],
DE [auth QA],
DEA [auth XA],
DF [auth QA],
DFA [auth YA],
DGA [auth YA],
DH [auth RA],
DHA [auth YA],
DI [auth RA],
DIA [auth YA],
DJ [auth RA],
DJA [auth YA],
DK [auth RA],
DKA [auth YA],
DL [auth RA],
DLA [auth YA],
DM [auth RA],
DMA [auth YA],
DN [auth RA],
DNA [auth YA],
DO [auth RA],
DOA [auth YA],
DP [auth RA],
DPA [auth YA],
DQ [auth RA],
DQA [auth YA],
DR [auth RA],
DRA [auth YA],
DS [auth RA],
DSA [auth YA],
DT [auth RA],
DTA [auth YA],
DU [auth RA],
DUA [auth YA],
DV [auth RA],
DVA [auth YA],
DW [auth RA],
DWA [auth YA],
DX [auth RA],
DXA [auth YA],
DY [auth RA],
DYA [auth YA],
DZ [auth RA],
DZA [auth YA],
EAA [auth RB],
EAB [auth YB],
ECA [auth XA],
EDA [auth XA],
EE [auth QA],
EEA [auth XA],
EF [auth QA],
EFA [auth YA],
EG [auth QQ],
EGA [auth YA],
EH [auth RA],
EHA [auth YA],
EI [auth RA],
EIA [auth YA],
EJ [auth RA],
EJA [auth YA],
EK [auth RA],
EKA [auth YA],
EL [auth RA],
ELA [auth YA],
EM [auth RA],
EMA [auth YA],
EN [auth RA],
ENA [auth YA],
EO [auth RA],
EOA [auth YA],
EP [auth RA],
EPA [auth YA],
EQ [auth RA],
EQA [auth YA],
ER [auth RA],
ERA [auth YA],
ES [auth RA],
ESA [auth YA],
ET [auth RA],
ETA [auth YA],
EU [auth RA],
EUA [auth YA],
EV [auth RA],
EVA [auth YA],
EW [auth RA],
EWA [auth YA],
EX [auth RA],
EXA [auth YA],
EY [auth RA],
EYA [auth YA],
EZ [auth RA],
EZA [auth YA],
FAA [auth RB],
FAB [auth YB],
FBB [auth Y7],
FCA [auth XA],
FDA [auth XA],
FE [auth QA],
FEA [auth XA],
FF [auth QA],
FFA [auth YA],
FG [auth QV],
FGA [auth YA],
FH [auth RA],
FHA [auth YA],
FI [auth RA],
FIA [auth YA],
FJ [auth RA],
FJA [auth YA],
FK [auth RA],
FKA [auth YA],
FL [auth RA],
FLA [auth YA],
FM [auth RA],
FMA [auth YA],
FN [auth RA],
FNA [auth YA],
FO [auth RA],
FOA [auth YA],
FP [auth RA],
FPA [auth YA],
FQ [auth RA],
FQA [auth YA],
FR [auth RA],
FRA [auth YA],
FS [auth RA],
FSA [auth YA],
FT [auth RA],
FTA [auth YA],
FU [auth RA],
FUA [auth YA],
FV [auth RA],
FVA [auth YA],
FW [auth RA],
FWA [auth YA],
FX [auth RA],
FXA [auth YA],
FY [auth RA],
FYA [auth YA],
FZ [auth RA],
FZA [auth YA],
GAA [auth RB],
GAB [auth YB],
GBA [auth R8],
GBB [auth Y8],
GCA [auth XA],
GDA [auth XA],
GE [auth QA],
GEA [auth XA],
GF [auth QA],
GFA [auth YA],
GG [auth QV],
GGA [auth YA],
GH [auth RA],
GHA [auth YA],
GI [auth RA],
GIA [auth YA],
GJ [auth RA],
GJA [auth YA],
GK [auth RA],
GKA [auth YA],
GL [auth RA],
GLA [auth YA],
GM [auth RA],
GMA [auth YA],
GN [auth RA],
GNA [auth YA],
GO [auth RA],
GOA [auth YA],
GP [auth RA],
GPA [auth YA],
GQ [auth RA],
GQA [auth YA],
GR [auth RA],
GRA [auth YA],
GS [auth RA],
GSA [auth YA],
GT [auth RA],
GTA [auth YA],
GU [auth RA],
GUA [auth YA],
GV [auth RA],
GVA [auth YA],
GW [auth RA],
GWA [auth YA],
GX [auth RA],
GXA [auth YA],
GY [auth RA],
GYA [auth YA],
GZ [auth RA],
GZA [auth YA],
HAA [auth RE],
HAB [auth YB],
HBA [auth R9],
HBB [auth Y9],
HCA [auth XA],
HDA [auth XA],
HE [auth QA],
HEA [auth XA],
HF [auth QA],
HFA [auth YA],
HG [auth QV],
HGA [auth YA],
HH [auth RA],
HHA [auth YA],
HI [auth RA],
HIA [auth YA],
HJ [auth RA],
HJA [auth YA],
HK [auth RA],
HKA [auth YA],
HL [auth RA],
HLA [auth YA],
HM [auth RA],
HMA [auth YA],
HN [auth RA],
HNA [auth YA],
HO [auth RA],
HOA [auth YA],
HP [auth RA],
HPA [auth YA],
HQ [auth RA],
HQA [auth YA],
HR [auth RA],
HRA [auth YA],
HS [auth RA],
HSA [auth YA],
HT [auth RA],
HTA [auth YA],
HU [auth RA],
HUA [auth YA],
HV [auth RA],
HVA [auth YA],
HW [auth RA],
HWA [auth YA],
HX [auth RA],
HXA [auth YA],
HY [auth RA],
HYA [auth YA],
HZ [auth RA],
HZA [auth YA],
IAA [auth RE],
IAB [auth YB],
ICA [auth XA],
ID [auth QA],
IDA [auth XA],
IE [auth QA],
IEA [auth XA],
IF [auth QA],
IFA [auth YA],
IG [auth QV],
IGA [auth YA],
IH [auth RA],
IHA [auth YA],
II [auth RA],
IIA [auth YA],
IJ [auth RA],
IJA [auth YA],
IK [auth RA],
IKA [auth YA],
IL [auth RA],
ILA [auth YA],
IM [auth RA],
IMA [auth YA],
IN [auth RA],
INA [auth YA],
IO [auth RA],
IOA [auth YA],
IP [auth RA],
IPA [auth YA],
IQ [auth RA],
IQA [auth YA],
IR [auth RA],
IRA [auth YA],
IS [auth RA],
ISA [auth YA],
IT [auth RA],
ITA [auth YA],
IU [auth RA],
IUA [auth YA],
IV [auth RA],
IVA [auth YA],
IW [auth RA],
IWA [auth YA],
IX [auth RA],
IXA [auth YA],
IY [auth RA],
IYA [auth YA],
IZ [auth RA],
IZA [auth YA],
JAA [auth RF],
JAB [auth YB],
JBA [auth XA],
JCA [auth XA],
JD [auth QA],
JDA [auth XA],
JE [auth QA],
JEA [auth XA],
JF [auth QA],
JFA [auth YA],
JG [auth QV],
JGA [auth YA],
JH [auth RA],
JHA [auth YA],
JI [auth RA],
JIA [auth YA],
JJ [auth RA],
JJA [auth YA],
JK [auth RA],
JKA [auth YA],
JL [auth RA],
JLA [auth YA],
JM [auth RA],
JMA [auth YA],
JN [auth RA],
JNA [auth YA],
JO [auth RA],
JOA [auth YA],
JP [auth RA],
JPA [auth YA],
JQ [auth RA],
JQA [auth YA],
JR [auth RA],
JRA [auth YA],
JS [auth RA],
JSA [auth YA],
JT [auth RA],
JTA [auth YA],
JU [auth RA],
JUA [auth YA],
JV [auth RA],
JVA [auth YA],
JW [auth RA],
JWA [auth YA],
JX [auth RA],
JXA [auth YA],
JY [auth RA],
JYA [auth YA],
JZ [auth RA],
JZA [auth YA],
KAA [auth RN],
KAB [auth YB],
KBA [auth XA],
KCA [auth XA],
KD [auth QA],
KDA [auth XA],
KE [auth QA],
KEA [auth XA],
KF [auth QA],
KFA [auth YA],
KG [auth QV],
KGA [auth YA],
KH [auth RA],
KHA [auth YA],
KI [auth RA],
KIA [auth YA],
KJ [auth RA],
KJA [auth YA],
KK [auth RA],
KKA [auth YA],
KL [auth RA],
KLA [auth YA],
KM [auth RA],
KMA [auth YA],
KN [auth RA],
KNA [auth YA],
KO [auth RA],
KOA [auth YA],
KP [auth RA],
KPA [auth YA],
KQ [auth RA],
KQA [auth YA],
KR [auth RA],
KRA [auth YA],
KS [auth RA],
KSA [auth YA],
KT [auth RA],
KTA [auth YA],
KU [auth RA],
KUA [auth YA],
KV [auth RA],
KVA [auth YA],
KW [auth RA],
KWA [auth YA],
KX [auth RA],
KXA [auth YA],
KY [auth RA],
KYA [auth YA],
KZ [auth RA],
KZA [auth YA],
LAA [auth RO],
LAB [auth YB],
LBA [auth XA],
LCA [auth XA],
LD [auth QA],
LDA [auth XA],
LE [auth QA],
LEA [auth XA],
LF [auth QA],
LFA [auth YA],
LG [auth QY],
LGA [auth YA],
LH [auth RA],
LHA [auth YA],
LI [auth RA],
LIA [auth YA],
LJ [auth RA],
LJA [auth YA],
LK [auth RA],
LKA [auth YA],
LL [auth RA],
LLA [auth YA],
LM [auth RA],
LMA [auth YA],
LN [auth RA],
LNA [auth YA],
LO [auth RA],
LOA [auth YA],
LP [auth RA],
LPA [auth YA],
LQ [auth RA],
LQA [auth YA],
LR [auth RA],
LRA [auth YA],
LS [auth RA],
LSA [auth YA],
LT [auth RA],
LTA [auth YA],
LU [auth RA],
LUA [auth YA],
LV [auth RA],
LVA [auth YA],
LW [auth RA],
LWA [auth YA],
LX [auth RA],
LXA [auth YA],
LY [auth RA],
LYA [auth YA],
LZ [auth RA],
LZA [auth YA],
MAA [auth RO],
MAB [auth YD],
MBA [auth XA],
MCA [auth XA],
MD [auth QA],
MDA [auth XA],
ME [auth QA],
MEA [auth XA],
MF [auth QA],
MFA [auth YA],
MG [auth RA],
MGA [auth YA],
MH [auth RA],
MHA [auth YA],
MI [auth RA],
MIA [auth YA],
MJ [auth RA],
MJA [auth YA],
MK [auth RA],
MKA [auth YA],
ML [auth RA],
MLA [auth YA],
MM [auth RA],
MMA [auth YA],
MN [auth RA],
MNA [auth YA],
MO [auth RA],
MOA [auth YA],
MP [auth RA],
MPA [auth YA],
MQ [auth RA],
MQA [auth YA],
MR [auth RA],
MRA [auth YA],
MS [auth RA],
MSA [auth YA],
MT [auth RA],
MTA [auth YA],
MU [auth RA],
MUA [auth YA],
MV [auth RA],
MVA [auth YA],
MW [auth RA],
MWA [auth YA],
MX [auth RA],
MXA [auth YA],
MY [auth RA],
MYA [auth YA],
MZ [auth RA],
MZA [auth YA],
NAA [auth RP],
NAB [auth YD],
NBA [auth XA],
NCA [auth XA],
ND [auth QA],
NDA [auth XA],
NE [auth QA],
NF [auth QA],
NFA [auth YA],
NG [auth RA],
NGA [auth YA],
NH [auth RA],
NHA [auth YA],
NI [auth RA],
NIA [auth YA],
NJ [auth RA],
NJA [auth YA],
NK [auth RA],
NKA [auth YA],
NL [auth RA],
NLA [auth YA],
NM [auth RA],
NMA [auth YA],
NN [auth RA],
NNA [auth YA],
NO [auth RA],
NOA [auth YA],
NP [auth RA],
NPA [auth YA],
NQ [auth RA],
NQA [auth YA],
NR [auth RA],
NRA [auth YA],
NS [auth RA],
NSA [auth YA],
NT [auth RA],
NTA [auth YA],
NU [auth RA],
NUA [auth YA],
NV [auth RA],
NVA [auth YA],
NW [auth RA],
NWA [auth YA],
NX [auth RA],
NXA [auth YA],
NY [auth RA],
NYA [auth YA],
NZ [auth RA],
NZA [auth YA],
OAA [auth RP],
OAB [auth YE],
OBA [auth XA],
OCA [auth XA],
OD [auth QA],
ODA [auth XA],
OE [auth QA],
OEA [auth XE],
OF [auth QA],
OFA [auth YA],
OG [auth RA],
OGA [auth YA],
OH [auth RA],
OHA [auth YA],
OI [auth RA],
OIA [auth YA],
OJ [auth RA],
OJA [auth YA],
OK [auth RA],
OKA [auth YA],
OL [auth RA],
OLA [auth YA],
OM [auth RA],
OMA [auth YA],
ON [auth RA],
ONA [auth YA],
OO [auth RA],
OOA [auth YA],
OP [auth RA],
OPA [auth YA],
OQ [auth RA],
OQA [auth YA],
OR [auth RA],
ORA [auth YA],
OS [auth RA],
OSA [auth YA],
OT [auth RA],
OTA [auth YA],
OU [auth RA],
OUA [auth YA],
OV [auth RA],
OVA [auth YA],
OW [auth RA],
OWA [auth YA],
OX [auth RA],
OXA [auth YA],
OY [auth RA],
OYA [auth YA],
OZ [auth RA],
OZA [auth YA],
PAA [auth RQ],
PAB [auth YE],
PBA [auth XA],
PCA [auth XA],
PD [auth QA],
PDA [auth XA],
PE [auth QA],
PEA [auth XL],
PF [auth QA],
PFA [auth YA],
PG [auth RA],
PGA [auth YA],
PH [auth RA],
PHA [auth YA],
PI [auth RA],
PIA [auth YA],
PJ [auth RA],
PJA [auth YA],
PK [auth RA],
PKA [auth YA],
PL [auth RA],
PLA [auth YA],
PM [auth RA],
PMA [auth YA],
PN [auth RA],
PNA [auth YA],
PO [auth RA],
POA [auth YA],
PP [auth RA],
PPA [auth YA],
PQ [auth RA],
PQA [auth YA],
PR [auth RA],
PRA [auth YA],
PS [auth RA],
PSA [auth YA],
PT [auth RA],
PTA [auth YA],
PU [auth RA],
PUA [auth YA],
PV [auth RA],
PVA [auth YA],
PW [auth RA],
PWA [auth YA],
PX [auth RA],
PXA [auth YA],
PY [auth RA],
PYA [auth YA],
PZ [auth RA],
PZA [auth YA],
QAA [auth RQ],
QAB [auth YO],
QBA [auth XA],
QCA [auth XA],
QD [auth QA],
QDA [auth XA],
QE [auth QA],
QEA [auth XM],
QF [auth QA],
QFA [auth YA],
QG [auth RA],
QGA [auth YA],
QH [auth RA],
QHA [auth YA],
QI [auth RA],
QIA [auth YA],
QJ [auth RA],
QJA [auth YA],
QK [auth RA],
QKA [auth YA],
QL [auth RA],
QLA [auth YA],
QM [auth RA],
QMA [auth YA],
QN [auth RA],
QNA [auth YA],
QO [auth RA],
QOA [auth YA],
QP [auth RA],
QPA [auth YA],
QQ [auth RA],
QQA [auth YA],
QR [auth RA],
QRA [auth YA],
QS [auth RA],
QSA [auth YA],
QT [auth RA],
QTA [auth YA],
QU [auth RA],
QUA [auth YA],
QV [auth RA],
QVA [auth YA],
QW [auth RA],
QWA [auth YA],
QX [auth RA],
QXA [auth YA],
QY [auth RA],
QYA [auth YA],
QZ [auth RA],
QZA [auth YA],
RAA [auth RR],
RAB [auth YP],
RBA [auth XA],
RCA [auth XA],
RD [auth QA],
RDA [auth XA],
RE [auth QA],
RF [auth QA],
RFA [auth YA],
RG [auth RA],
RGA [auth YA],
RH [auth RA],
RHA [auth YA],
RI [auth RA],
RIA [auth YA],
RJ [auth RA],
RJA [auth YA],
RK [auth RA],
RKA [auth YA],
RL [auth RA],
RLA [auth YA],
RM [auth RA],
RMA [auth YA],
RN [auth RA],
RNA [auth YA],
RO [auth RA],
ROA [auth YA],
RP [auth RA],
RPA [auth YA],
RQ [auth RA],
RQA [auth YA],
RR [auth RA],
RRA [auth YA],
RS [auth RA],
RSA [auth YA],
RT [auth RA],
RTA [auth YA],
RU [auth RA],
RUA [auth YA],
RV [auth RA],
RVA [auth YA],
RW [auth RA],
RWA [auth YA],
RX [auth RA],
RXA [auth YA],
RY [auth RA],
RYA [auth YA],
RZ [auth RA],
RZA [auth YA],
SAA [auth RT],
SAB [auth YP],
SBA [auth XA],
SCA [auth XA],
SD [auth QA],
SDA [auth XA],
SE [auth QA],
SEA [auth XQ],
SF [auth QA],
SFA [auth YA],
SG [auth RA],
SGA [auth YA],
SH [auth RA],
SHA [auth YA],
SI [auth RA],
SIA [auth YA],
SJ [auth RA],
SJA [auth YA],
SK [auth RA],
SKA [auth YA],
SL [auth RA],
SLA [auth YA],
SM [auth RA],
SMA [auth YA],
SN [auth RA],
SNA [auth YA],
SO [auth RA],
SOA [auth YA],
SP [auth RA],
SPA [auth YA],
SQ [auth RA],
SQA [auth YA],
SR [auth RA],
SRA [auth YA],
SS [auth RA],
SSA [auth YA],
ST [auth RA],
STA [auth YA],
SU [auth RA],
SUA [auth YA],
SV [auth RA],
SVA [auth YA],
SW [auth RA],
SWA [auth YA],
SX [auth RA],
SXA [auth YA],
SY [auth RA],
SYA [auth YA],
SZ [auth RA],
SZA [auth YA],
TAA [auth RU],
TAB [auth YP],
TBA [auth XA],
TCA [auth XA],
TD [auth QA],
TDA [auth XA],
TE [auth QA],
TEA [auth XS],
TF [auth QA],
TFA [auth YA],
TG [auth RA],
TGA [auth YA],
TH [auth RA],
THA [auth YA],
TI [auth RA],
TIA [auth YA],
TJ [auth RA],
TJA [auth YA],
TK [auth RA],
TKA [auth YA],
TL [auth RA],
TLA [auth YA],
TM [auth RA],
TMA [auth YA],
TN [auth RA],
TNA [auth YA],
TO [auth RA],
TOA [auth YA],
TP [auth RA],
TPA [auth YA],
TQ [auth RA],
TQA [auth YA],
TR [auth RA],
TRA [auth YA],
TS [auth RA],
TSA [auth YA],
TT [auth RA],
TTA [auth YA],
TU [auth RA],
TUA [auth YA],
TV [auth RA],
TVA [auth YA],
TW [auth RA],
TWA [auth YA],
TX [auth RA],
TXA [auth YA],
TY [auth RA],
TYA [auth YA],
TZ [auth RA],
TZA [auth YA],
UAA [auth RY],
UAB [auth YQ],
UBA [auth XA],
UCA [auth XA],
UD [auth QA],
UDA [auth XA],
UE [auth QA],
UEA [auth XV],
UF [auth QA],
UFA [auth YA],
UG [auth RA],
UGA [auth YA],
UH [auth RA],
UHA [auth YA],
UI [auth RA],
UIA [auth YA],
UJ [auth RA],
UJA [auth YA],
UK [auth RA],
UKA [auth YA],
UL [auth RA],
ULA [auth YA],
UM [auth RA],
UMA [auth YA],
UN [auth RA],
UNA [auth YA],
UO [auth RA],
UOA [auth YA],
UP [auth RA],
UPA [auth YA],
UQ [auth RA],
UQA [auth YA],
UR [auth RA],
URA [auth YA],
US [auth RA],
USA [auth YA],
UT [auth RA],
UTA [auth YA],
UU [auth RA],
UUA [auth YA],
UV [auth RA],
UVA [auth YA],
UW [auth RA],
UWA [auth YA],
UX [auth RA],
UXA [auth YA],
UY [auth RA],
UYA [auth YA],
UZ [auth RA],
UZA [auth YA],
VAB [auth YQ],
VBA [auth XA],
VCA [auth XA],
VD [auth QA],
VDA [auth XA],
VE [auth QA],
VEA [auth XV],
VF [auth QA],
VFA [auth YA],
VG [auth RA],
VGA [auth YA],
VH [auth RA],
VHA [auth YA],
VI [auth RA],
VIA [auth YA],
VJ [auth RA],
VJA [auth YA],
VK [auth RA],
VKA [auth YA],
VL [auth RA],
VLA [auth YA],
VM [auth RA],
VMA [auth YA],
VN [auth RA],
VNA [auth YA],
VO [auth RA],
VOA [auth YA],
VP [auth RA],
VPA [auth YA],
VQ [auth RA],
VQA [auth YA],
VR [auth RA],
VRA [auth YA],
VS [auth RA],
VSA [auth YA],
VT [auth RA],
VTA [auth YA],
VU [auth RA],
VUA [auth YA],
VV [auth RA],
VVA [auth YA],
VW [auth RA],
VWA [auth YA],
VX [auth RA],
VXA [auth YA],
VY [auth RA],
VYA [auth YA],
VZ [auth RA],
VZA [auth YA],
WAA [auth R0],
WAB [auth YQ],
WBA [auth XA],
WCA [auth XA],
WD [auth QA],
WDA [auth XA],
WE [auth QA],
WEA [auth XV],
WF [auth QA],
WFA [auth YA],
WG [auth RA],
WGA [auth YA],
WH [auth RA],
WHA [auth YA],
WI [auth RA],
WIA [auth YA],
WJ [auth RA],
WJA [auth YA],
WK [auth RA],
WKA [auth YA],
WL [auth RA],
WLA [auth YA],
WM [auth RA],
WMA [auth YA],
WN [auth RA],
WNA [auth YA],
WO [auth RA],
WOA [auth YA],
WP [auth RA],
WPA [auth YA],
WQ [auth RA],
WQA [auth YA],
WR [auth RA],
WRA [auth YA],
WS [auth RA],
WSA [auth YA],
WT [auth RA],
WTA [auth YA],
WU [auth RA],
WUA [auth YA],
WV [auth RA],
WVA [auth YA],
WW [auth RA],
WWA [auth YA],
WX [auth RA],
WXA [auth YA],
WY [auth RA],
WYA [auth YA],
WZ [auth RA],
WZA [auth YA],
XAA [auth R0],
XAB [auth YX],
XBA [auth XA],
XCA [auth XA],
XD [auth QA],
XDA [auth XA],
XE [auth QA],
XEA [auth XV],
XF [auth QA],
XFA [auth YA],
XG [auth RA],
XGA [auth YA],
XH [auth RA],
XHA [auth YA],
XI [auth RA],
XIA [auth YA],
XJ [auth RA],
XJA [auth YA],
XK [auth RA],
XKA [auth YA],
XL [auth RA],
XLA [auth YA],
XM [auth RA],
XMA [auth YA],
XN [auth RA],
XNA [auth YA],
XO [auth RA],
XOA [auth YA],
XP [auth RA],
XPA [auth YA],
XQ [auth RA],
XQA [auth YA],
XR [auth RA],
XRA [auth YA],
XS [auth RA],
XSA [auth YA],
XT [auth RA],
XTA [auth YA],
XU [auth RA],
XUA [auth YA],
XV [auth RA],
XVA [auth YA],
XW [auth RA],
XWA [auth YA],
XX [auth RA],
XXA [auth YA],
XY [auth RA],
XYA [auth YA],
XZ [auth RA],
XZA [auth YA],
YAA [auth R0],
YAB [auth YX],
YBA [auth XA],
YCA [auth XA],
YD [auth QA],
YDA [auth XA],
YE [auth QA],
YEA [auth XV],
YF [auth QC],
YFA [auth YA],
YG [auth RA],
YGA [auth YA],
YH [auth RA],
YHA [auth YA],
YI [auth RA],
YIA [auth YA],
YJ [auth RA],
YJA [auth YA],
YK [auth RA],
YKA [auth YA],
YL [auth RA],
YLA [auth YA],
YM [auth RA],
YMA [auth YA],
YN [auth RA],
YNA [auth YA],
YO [auth RA],
YOA [auth YA],
YP [auth RA],
YPA [auth YA],
YQ [auth RA],
YQA [auth YA],
YR [auth RA],
YRA [auth YA],
YS [auth RA],
YSA [auth YA],
YT [auth RA],
YTA [auth YA],
YU [auth RA],
YUA [auth YA],
YV [auth RA],
YVA [auth YA],
YW [auth RA],
YWA [auth YA],
YX [auth RA],
YXA [auth YA],
YY [auth RA],
YYA [auth YA],
YZ [auth RA],
YZA [auth YA],
ZAA [auth R0],
ZAB [auth YY],
ZBA [auth XA],
ZCA [auth XA],
ZD [auth QA],
ZDA [auth XA],
ZE [auth QA],
ZEA [auth XV],
ZFA [auth YA],
ZG [auth RA],
ZGA [auth YA],
ZH [auth RA],
ZHA [auth YA],
ZI [auth RA],
ZIA [auth YA],
ZJ [auth RA],
ZJA [auth YA],
ZK [auth RA],
ZKA [auth YA],
ZL [auth RA],
ZLA [auth YA],
ZM [auth RA],
ZMA [auth YA],
ZN [auth RA],
ZNA [auth YA],
ZO [auth RA],
ZOA [auth YA],
ZP [auth RA],
ZPA [auth YA],
ZQ [auth RA],
ZQA [auth YA],
ZR [auth RA],
ZRA [auth YA],
ZS [auth RA],
ZSA [auth YA],
ZT [auth RA],
ZTA [auth YA],
ZU [auth RA],
ZUA [auth YA],
ZV [auth RA],
ZVA [auth YA],
ZW [auth RA],
ZWA [auth YA],
ZX [auth RA],
ZXA [auth YA],
ZY [auth RA],
ZYA [auth YA],
ZZ [auth RA],
ZZA [auth YA]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.68 Å
  • R-Value Free: 0.274 
  • R-Value Work: 0.228 
  • R-Value Observed: 0.230 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 210.696α = 90
b = 446.14β = 90
c = 616.004γ = 90
Software Package:
Software NamePurpose
XDSdata reduction
XSCALEdata scaling
PHENIXphasing
PHENIXrefinement
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesR01GM093279
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesR01GM072528

Revision History  (Full details and data files)

  • Version 1.0: 2018-11-14
    Type: Initial release
  • Version 1.1: 2018-12-12
    Changes: Data collection, Database references
  • Version 1.2: 2019-02-20
    Changes: Author supporting evidence, Data collection
  • Version 1.3: 2019-07-03
    Changes: Data collection, Database references
  • Version 1.4: 2020-01-01
    Changes: Author supporting evidence
  • Version 1.5: 2023-10-04
    Changes: Data collection, Database references, Derived calculations, Refinement description