6ZR4

Crystal structure of tetrameric fibrinogen-like recognition domain of FIBCD1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.184 
  • R-Value Work: 0.166 
  • R-Value Observed: 0.167 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Crystal structures of human immune protein FIBCD1 reveal an extended ligand binding site compatible with recognition of chitin oligomers

Williams, H.M.Moeller, J.B.Burns, I.Schlosser, A.Sorensen, G.L.Greenhough, T.J.Holmskov, U.Shrive, A.K.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Fibrinogen C domain-containing protein 1A, B226Homo sapiensMutation(s): 0 
Gene Names: FIBCD1UNQ701/PRO1346
UniProt & NIH Common Fund Data Resources
Find proteins for Q8N539 (Homo sapiens)
Explore Q8N539 
Go to UniProtKB:  Q8N539
PHAROS:  Q8N539
Protein Feature View
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  • Reference Sequence
Oligosaccharides

Help

Entity ID: 2
MoleculeChainsChain Length2D DiagramGlycosylation3D Interactions
beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranoseC3N-Glycosylation Oligosaccharides Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.184 
  • R-Value Work: 0.166 
  • R-Value Observed: 0.167 
  • Space Group: P 4
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 118.349α = 90
b = 118.349β = 90
c = 44.089γ = 90
Software Package:
Software NamePurpose
MOSFLMdata reduction
Aimlessdata scaling
REFMACrefinement
PDB_EXTRACTdata extraction
REFMACphasing

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Science and Technology Funding CouncilUnited KingdomMX14692

Revision History  (Full details and data files)

  • Version 1.0: 2021-07-21
    Type: Initial release