6ZPP

g7941: a virulence factor from Drechmaria coniospora

• PDB DOI: https://doi.org/10.2210/pdb6ZPP/pdb

• Classification: IMMUNE SYSTEM
• Organism(s): Drechmeria coniospora
• Expression System: Escherichia coli
• Mutation(s): Yes 


• Deposited: 2020-07-09 Released: 2022-01-19 
• Deposition Author(s): Leone, P., Roussel, A., Zimberger, C.

---

Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.50 Å
• R-Value Free: 0.209 
• R-Value Work: 0.185 
• R-Value Observed: 0.186 

Literature

Crystal structure of a virulence factor from Drechmaria coniospora, a C. elegans pathogen

Leone, P., Zimberger, C., Roussel, A., Ewbank, J.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: light scattering

Macromolecule Content

• Total Structure Weight: 21.01 kDa 
• Atom Count: 1,446 
• Modelled Residue Count: 157 
• Deposited Residue Count: 190 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
virulence factor	A	190	Drechmeria coniospora	Mutation(s): 2  Gene Names: DCS_06842
UniProt
Find proteins for A0A151GCU7 (Drechmeria coniospora) Explore A0A151GCU7  Go to UniProtKB:  A0A151GCU7

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
CL	B [auth A]	CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.50 Å
• R-Value Free: 0.209 
• R-Value Work: 0.185 
• R-Value Observed: 0.186 
• Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 44.127	α = 90
b = 31.2	β = 91.96
c = 59.316	γ = 90

Software Package:

Software Name	Purpose
XDS	data reduction
SCALA	data scaling
SHELXDE	phasing
PHENIX	refinement
PDB_EXTRACT	data extraction

Structure Validation

Entry History 

Deposition Data

• Released Date: 2022-01-19 
Deposition Author(s): Leone, P., Roussel, A., Zimberger, C.

Revision History  

• Version 1.0: 2022-01-19
  Type: Initial release
  
• Version 2.0: 2022-12-21
  Changes: Advisory, Database references, Polymer sequence, Structure summary