Crystal structure of OmpF porin soaked in ciprofloxacin metaloantibiotic
Sousa, C.F., Morais-Cabral, J., Gameiro, P.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Outer membrane porin F | A [auth B] | 362 | Escherichia coli K-12 | Mutation(s): 0  Gene Names: ompF, cmlB, coa, cry, tolF, b0929, JW0912 Membrane Entity: Yes  | |
UniProt | |||||
Find proteins for P02931 (Escherichia coli (strain K12)) Explore P02931  Go to UniProtKB:  P02931 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P02931 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
QLB Query on QLB | C [auth B], D [auth B] | 2-[2-(2-octoxyethoxy)ethoxy]ethanol C14 H30 O4 XIVLVYLYOMHUGB-UHFFFAOYSA-N | |||
MG Query on MG | B | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N | |||
NA Query on NA | E [auth B] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 135.943 | α = 90 |
b = 135.943 | β = 90 |
c = 51.86 | γ = 120 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
XDS | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Foundation for Science and Technology (FCT) | Portugal | -- |