6ZBY | pdb_00006zby

Cryo-EM structure of the nitrilase from Pseudomonas fluorescens EBC191 at 3.3 Angstroms

• PDB DOI: https://doi.org/10.2210/pdb6ZBY/pdb
• EM Map EMD-11158: EMDB EMDataResource

• Classification: HYDROLASE
• Organism(s): Pseudomonas fluorescens
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2020-06-09 Released: 2021-06-30 
• Deposition Author(s): Eppinger, E., Stolz, A., Sewell, B.T.

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 3.10 Å
• Aggregation State: FILAMENT 
• Reconstruction Method: HELICAL 

Literature

Cryo-EM structure of the nitrilase from Pseudomonas fluorescens EBC191 at 3.3 Angstroms

Eppinger, E., Stolz, A., Sewell, B.T.

To be published.

Biological Assembly 1  

Global Symmetry: Helical - H  (Explore in 3D)
Global Stoichiometry: Homo 12-mer - A12 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: microscopy

Macromolecule Content 

• Total Structure Weight: 452.89 kDa 
• Atom Count: 28,836 
• Modeled Residue Count: 3,792 
• Deposited Residue Count: 4,200 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
NitA	A, B, C, D, E, F, G, H, I, J, K, L	350	Pseudomonas fluorescens	Mutation(s): 0  Gene Names: nitA
UniProt
Find proteins for Q5EG61 (Pseudomonas fluorescens) Explore Q5EG61  Go to UniProtKB:  Q5EG61

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 3.10 Å
• Aggregation State: FILAMENT 
• Reconstruction Method: HELICAL 

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	ISOLDE
MODEL REFINEMENT	Coot
RECONSTRUCTION	RELION	3.1

Structure Validation

Entry History 

Deposition Data

• Released Date: 2021-06-30 
Deposition Author(s): Eppinger, E., Stolz, A., Sewell, B.T.

Revision History  

• Version 1.0: 2021-06-30
  Type: Initial release
  
• Version 1.1: 2024-05-01
  Changes: Data collection, Database references