6YNG

MicroED structure of granulin determined from five native nanocrystalline granulovirus occlusion bodies

Experimental Data Snapshot

  • Method: ELECTRON CRYSTALLOGRAPHY
  • Resolution: 2.80 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.184 
  • R-Value Observed: 0.188 

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This is version 1.2 of the entry. See complete history. 


Literature

MicroED structure of granulin determined from five native nanocrystalline granulovirus occlusion bodies

Bunker, R.D.

To be published.

Macromolecules
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Granulin248Cydia pomonella granulosis virus (isolate Mexican)Mutation(s): 0 
UniProt
Find proteins for P87577 (Cydia pomonella granulosis virus (isolate Mexico/1963))
Explore P87577 
Go to UniProtKB:  P87577
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP87577
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON CRYSTALLOGRAPHY
  • Resolution: 2.80 Å
  • R-Value Free: 0.226 
  • R-Value Work: 0.184 
  • R-Value Observed: 0.188 
  • Space Group: I 2 3
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 103.657α = 90
b = 103.657β = 90
c = 103.657γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX

Structure Validation

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Entry History 

Deposition Data

  • Released Date: 2020-04-29 
    • Deposition Author(s): Bunker, R.D.

Revision History  (Full details and data files)

  • Version 1.0: 2020-04-29
    Type: Initial release
  • Version 1.1: 2023-08-09
    Changes: Data collection, Database references, Derived calculations, Refinement description
  • Version 1.2: 2024-02-14
    Changes: Data collection, Refinement description