6Y7Y

Fragments KCL_771 and KCL_802 in complex with MAP kinase p38-alpha


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.51 Å
  • R-Value Free: 0.248 
  • R-Value Work: 0.220 
  • R-Value Observed: 0.221 

wwPDB Validation 3D Report Full Report



Literature

Fragments KCL_771 and KCL_802 in complex with MAP kinase p38-alpha

De Nicola, G.F.Nichols, C.E.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Mitogen-activated protein kinase 14A360Mus musculusMutation(s): 1 
Gene Names: Mapk14Crk1Csbp1Csbp2
EC: 2.7.11.24
Find proteins for P47811 (Mus musculus)
Explore P47811 
Go to UniProtKB:  P47811
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 5 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SB4
Query on SB4

Download CCD File 
A
4-(4-FLUOROPHENYL)-1-(4-PIPERIDINYL)-5-(2-AMINO-4-PYRIMIDINYL)-IMIDAZOLE
C18 H19 F N6
VSPFURGQAYMVAN-UHFFFAOYSA-N
 Ligand Interaction
LOT
Query on LOT

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A
6-[2,5-bis(oxidanylidene)pyrrolidin-1-yl]pyridine-3-sulfonamide
C9 H9 N3 O4 S
LBSDOHDMKVMJLR-UHFFFAOYSA-N
 Ligand Interaction
OFQ
Query on OFQ

Download CCD File 
A
(2-azanyl-2-adamantyl)methanol
C11 H19 N O
JNAKWHJSIJOZFK-HQUNYVMJSA-N
 Ligand Interaction
CA
Query on CA

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A
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
CL
Query on CL

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A
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.51 Å
  • R-Value Free: 0.248 
  • R-Value Work: 0.220 
  • R-Value Observed: 0.221 
  • Space Group: I 2 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 80.38α = 90
b = 102.586β = 90
c = 104.731γ = 90
Software Package:
Software NamePurpose
DIALSdata collection
PHENIXrefinement
DIALSdata reduction
DIALSdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
British Heart FoundationUnited KingdomSP/14/2/30922, FS/14/29/30896
Medical Research Council (MRC, United Kingdom)United KingdomMC_PC_17164

Revision History 

  • Version 1.0: 2020-03-11
    Type: Initial release