6XYK | pdb_00006xyk

Crystal structure of bovine trypsin at room temperature.

  • Classification: HYDROLASE
  • Organism(s): Bos taurus
  • Mutation(s): No 

  • Deposited: 2020-01-30 Released: 2021-01-27 
  • Deposition Author(s): Jensen, M.

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Free: 
    0.163 (Depositor), 0.165 (DCC) 
  • R-Value Work: 
    0.144 (Depositor), 0.150 (DCC) 
  • R-Value Observed: 
    0.145 (Depositor) 

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

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This is version 2.2 of the entry. See complete history. 

Literature

Femtosecond structure of bovine trypsin at room temperature

Jensen, M.

To be published.

Macromolecule Content 

  • Total Structure Weight: 23.58 kDa 
  • Atom Count: 1,863 
  • Modeled Residue Count: 223 
  • Deposited Residue Count: 223 
  • Unique protein chains: 1

Macromolecules

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|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Cationic trypsin223Bos taurusMutation(s): 0 
EC: 3.4.21.4
UniProt
Find proteins for P00760 (Bos taurus)
Explore P00760 
Go to UniProtKB:  P00760
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP00760
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Free:  0.163 (Depositor), 0.165 (DCC) 
  • R-Value Work:  0.144 (Depositor), 0.150 (DCC) 
  • R-Value Observed: 0.145 (Depositor) 
Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 54.83α = 90
b = 58.58β = 90
c = 67.41γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
PHENIXrefinement
XDSdata reduction
XSCALEdata scaling
PHENIXphasing

Structure Validation

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Entry History 

Deposition Data

  • Released Date: 2021-01-27 
    • Deposition Author(s): Jensen, M.

Revision History  (Full details and data files)

  • Version 1.0: 2021-01-27
    Type: Initial release
  • Version 2.0: 2021-08-04
    Changes: Atomic model, Data collection, Derived calculations, Non-polymer description, Structure summary
  • Version 2.1: 2024-01-24
    Changes: Data collection, Database references, Refinement description
  • Version 2.2: 2024-10-16
    Changes: Structure summary