Crystal Structure of Diphosphomevalonate decarboxylase (MVD1) from Cryptococcus neoformans var. grubii serotype A
Abendroth, J., Lorimer, D.D., Horanyi, P.S., Edwards, T.E.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Diphosphomevalonate decarboxylase | 403 | Cryptococcus neoformans var. grubii H99 | Mutation(s): 0  Gene Names: CNAG_05125 EC: 4.1.1.33 | ![]() | |
UniProt | |||||
Find proteins for J9VRT5 (Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487)) Explore J9VRT5  Go to UniProtKB:  J9VRT5 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | J9VRT5 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ADE Query on ADE | AA [auth H], K [auth A], N [auth B], R [auth D], T [auth E] | ADENINE C5 H5 N5 GFFGJBXGBJISGV-UHFFFAOYSA-N | |||
SO4 Query on SO4 | I [auth A] J [auth A] L [auth B] M [auth B] O [auth C] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
EDO Query on EDO | W [auth F], X [auth G] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 95.51 | α = 90 |
b = 168.05 | β = 90.14 |
c = 101.21 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
XDS | data reduction |
XSCALE | data scaling |
PDB_EXTRACT | data extraction |
MoRDa | phasing |
Coot | model building |