Structure of a novel antithrombotic agent Agkisacucetin in complex with the platelet glycoprotein Ib receptor
Wang, J., Gao, Y.X., Ke, J.Y., Zhu, Z.L., Niu, L.W.To be published.
Experimental Data Snapshot
Starting Models: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Platelet glycoprotein Ib alpha chain | A [auth G] | 305 | Homo sapiens | Mutation(s): 0  Gene Names: GP1BA | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P07359 (Homo sapiens) Explore P07359  Go to UniProtKB:  P07359 | |||||
PHAROS:  P07359 GTEx:  ENSG00000185245  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P07359 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Snaclec agglucetin subunit alpha-1 | B [auth A] | 154 | Deinagkistrodon acutus | Mutation(s): 0  | |
UniProt | |||||
Find proteins for Q8JIV9 (Deinagkistrodon acutus) Explore Q8JIV9  Go to UniProtKB:  Q8JIV9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8JIV9 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Snaclec agglucetin subunit beta-2 | C [auth B] | 149 | Deinagkistrodon acutus | Mutation(s): 0  | |
UniProt | |||||
Find proteins for Q8AYA3 (Deinagkistrodon acutus) Explore Q8AYA3  Go to UniProtKB:  Q8AYA3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8AYA3 | ||||
Sequence AnnotationsExpand | |||||
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Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 86.304 | α = 90 |
b = 86.304 | β = 90 |
c = 189.963 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
XDS | data reduction |
Aimless | data scaling |
PHASER | phasing |
PDB_EXTRACT | data extraction |
Funding Organization | Location | Grant Number |
---|---|---|
National Natural Science Foundation of China (NSFC) | China | U1632124 |