Structure of the PR domain from human PRDM5
Mou, T.C., Kerchner, K.M., Sprang, S.R., Briknarova, K.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
PR domain zinc finger protein 5 | 130 | Homo sapiens | Mutation(s): 0  Gene Names: PRDM5, PFM2 EC: 2.1.1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9NQX1 (Homo sapiens) Explore Q9NQX1  Go to UniProtKB:  Q9NQX1 | |||||
PHAROS:  Q9NQX1 GTEx:  ENSG00000138738  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9NQX1 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PEG Query on PEG | C [auth A], D [auth B], E [auth B] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 47.527 | α = 90 |
b = 56.083 | β = 90 |
c = 105.307 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
HKL-3000 | data reduction |
HKL-3000 | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | NIH P20 GM103546 |