6WQP

GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.60 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.203 
  • R-Value Observed: 0.204 

wwPDB Validation   3D Report Full Report



Literature

GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis

Bianchetti, C.M.Bingman, C.A.Smith, R.W.Glasgow, E.M.Fox, B.G.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
EndoglucanaseAB354Ruminococcus champanellensisMutation(s): 0 
Find proteins for D4LAX7 (Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / KCTC 15320 / 18P13))
Explore D4LAX7 
Go to UniProtKB:  D4LAX7
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EDO
Query on EDO

Download CCD File 
A, B
1,2-ETHANEDIOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
BCT
Query on BCT

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B
BICARBONATE ION
C H O3
BVKZGUZCCUSVTD-UHFFFAOYSA-M
 Ligand Interaction
NA
Query on NA

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A, B
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.60 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.203 
  • R-Value Observed: 0.204 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 49.98α = 90
b = 85.85β = 96.538
c = 87.2γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
XSCALEdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Department of Energy (DOE, United States)United StatesDEFC0207ER64494
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesNIH 5 T32 GM008349 Biotechnology Training Program

Revision History 

  • Version 1.0: 2020-11-18
    Type: Initial release