6WKT | pdb_00006wkt

Cu(I)-bound Copper Storage Protein BsCsp3

• PDB DOI: https://doi.org/10.2210/pdb6WKT/pdb
• EM Map EMD-21708: EMDB EMDataResource

• Classification: METAL BINDING PROTEIN
• Organism(s): Bacillus subtilis subsp. subtilis str. 168
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2020-04-16 Released: 2021-04-21 
• Deposition Author(s): Chen, J.Z., Oken, A., Dennison, C., Lee, J., David, S.
• Funding Organization(s): Other private, Biotechnology and Biological Sciences Research Council (BBSRC)

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 3.40 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Starting Model: experimental

Literature

Cu(I)-bound Copper Storage Protein BsCsp3

Chen, J.Z., Dennison, C.

To be published.

Biological Assembly 1  

Global Symmetry: Dihedral - D2  (Explore in 3D)
Global Stoichiometry: Homo 4-mer - A4 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: gel filtration

Macromolecule Content 

• Total Structure Weight: 47.42 kDa 
• Atom Count: 3,152 
• Modeled Residue Count: 424 
• Deposited Residue Count: 432 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Csp3	A, B, C, D	108	Bacillus subtilis subsp. subtilis str. 168	Mutation(s): 0  Gene Names: yhjQ, BSU10600
UniProt
Find proteins for O07571 (Bacillus subtilis (strain 168)) Explore O07571  Go to UniProtKB:  O07571

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 3.40 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

EM Software:

Task	Software Package	Version
RECONSTRUCTION	RELION	3.0-beta-2
MODEL REFINEMENT	PHENIX	1.14-3260

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2021-04-21 
Deposition Author(s): Chen, J.Z., Oken, A., Dennison, C., Lee, J., David, S.

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Funding Organization	Location	Grant Number
Other private	United States	OHSU Startup package
Biotechnology and Biological Sciences Research Council (BBSRC)	United Kingdom	1668110

Revision History  

• Version 1.0: 2021-04-21
  Type: Initial release
  
• Version 1.1: 2024-03-06
  Changes: Data collection, Database references, Refinement description