6WHF

class C beta-lactamase from Escherichia coli in complex with cephalothin


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.40 Å
  • R-Value Free: 0.181 
  • R-Value Work: 0.163 
  • R-Value Observed: 0.164 

wwPDB Validation 3D Report Full Report



Literature

class C beta-lactamase from Escherichia coli in complex with Cephalothin

Chang, C.Maltseva, N.Endres, M.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Beta-lactamase
A, B
359Escherichia coli A35218RMutation(s): 0 
Gene Names: 
EC: 3.5.2.6
Find proteins for Q104Z6 (Escherichia coli)
Go to UniProtKB:  Q104Z6
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
9EP
Query on 9EP

Download CCD File 
A, B
(2R)-5-[(acetyloxy)methyl]-2-{(1R)-2-oxo-1-[(thiophen-2-ylacetyl)amino]ethyl}-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid
C16 H18 N2 O6 S2
MXSQWXIVWHYOCY-IUODEOHRSA-N
 Ligand Interaction
EDO
Query on EDO

Download CCD File 
A, B
1,2-ETHANEDIOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.40 Å
  • R-Value Free: 0.181 
  • R-Value Work: 0.163 
  • R-Value Observed: 0.164 
  • Space Group: C 1 2 1
  • Diffraction Data DOI: 6WHF Protein Diffraction
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 155.185α = 90
b = 46.298β = 116.58
c = 108.854γ = 90
Software Package:
Software NamePurpose
SBC-Collectdata collection
PHENIXrefinement
SCALEPACKdata scaling
PDB_EXTRACTdata extraction
HKL-3000data reduction
HKL-3000phasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2020-04-22
    Type: Initial release