6VTV

Crystal structure of PuuD gamma-glutamyl-gamma-aminobutyrate hydrolase from E. coli


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.06 Å
  • R-Value Free: 0.218 
  • R-Value Work: 0.173 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

PuuD gamma-glutamyl-gamma-aminobutyrate hydrolase

Stogios, P.J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD
A, B
258Escherichia coli (strain K12)Mutation(s): 0 
Gene Names: puuD (ycjL)
EC: 3.5.1.94
Find proteins for P76038 (Escherichia coli (strain K12))
Go to UniProtKB:  P76038
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MN
Query on MN

Download SDF File 
Download CCD File 
A, B
MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.06 Å
  • R-Value Free: 0.218 
  • R-Value Work: 0.173 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 69.161α = 90.00
b = 72.177β = 90.00
c = 98.631γ = 90.00
Software Package:
Software NamePurpose
PHENIXphasing
HKL-3000data scaling
PHENIXrefinement
HKL-3000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)United StatesHHSN272201700060C

Revision History 

  • Version 1.0: 2020-02-26
    Type: Initial release