6VOP

Crystal structure of YgbL, a putative aldolase/epimerase/decarboxylase from Escherichia coli


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.239 
  • R-Value Work: 0.189 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of YgbL, a putative aldolase/epimerase/decarboxylase from Escherichia coli

Stogios, P.J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Aldolase
A
212Escherichia coliMutation(s): 2 
Gene Names: ygbL (fucA_1, fucA_2, fucA_3)
EC: 4.1.2.17
Find proteins for J7R4S3 (Escherichia coli)
Go to UniProtKB:  J7R4S3
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.239 
  • R-Value Work: 0.189 
  • Space Group: F 4 3 2
Unit Cell:
Length (Å)Angle (°)
a = 174.796α = 90.00
b = 174.796β = 90.00
c = 174.796γ = 90.00
Software Package:
Software NamePurpose
HKL-3000data reduction
BALBESphasing
PHENIXrefinement
HKL-3000data scaling
PHENIXmodel building
Cootmodel building

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)CanadaHHSN272201700060C

Revision History 

  • Version 1.0: 2020-02-19
    Type: Initial release