6V98

Crystal structure of Type VI secretion system effector, TseH (VCA0285)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.217 
  • R-Value Work: 0.174 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Envelope Stress Responses Defend Against Type Six Secretion System Attacks

Hersch, S.J.Watanabe, N.Stietz, M.S.Manera, K.Kamal, F.Burkinshaw, B.Lam, L.Pun, A.Li, M.Savchenko, A.Dong, T.G.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Cysteine hydrolase
A
203Vibrio choleraeMutation(s): 0 
Find proteins for A0A0H7IDZ2 (Vibrio cholerae)
Go to UniProtKB:  A0A0H7IDZ2
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CA
Query on CA

Download SDF File 
Download CCD File 
A
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
CAF
Query on CAF
A
L-PEPTIDE LINKINGC5 H12 As N O3 SCYS
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.217 
  • R-Value Work: 0.174 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 45.756α = 90.00
b = 63.645β = 90.00
c = 70.292γ = 90.00
Software Package:
Software NamePurpose
HKL-3000data reduction
PHENIXrefinement
Aimlessdata scaling
HKL-3000data scaling
XDSdata reduction
SHARPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)United States--

Revision History 

  • Version 1.0: 2020-01-15
    Type: Initial release