6U1U

Human Angiopoietin-Like 4 C-Terminal Domain (cANGPTL4) with Palmitic Acid


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.211 
  • R-Value Work: 0.194 
  • R-Value Observed: 0.195 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.1 of the entry. See complete history


Literature

Crystal Structures of Angiopoietin-Like 4 C-Terminal Domain (cANGPTL4) Reveal a Binding Pocket with Multiple Ligands

Tarver, C.L.Yuan, Q.Singhal, A.J.Ramaker, R.Cooper, S.Pusey, M.L.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Angiopoietin-related protein 4A216Homo sapiensMutation(s): 0 
Gene Names: ANGPTL4ARP4HFARPPGARPP1158PSEC0166UNQ171/PRO197
UniProt & NIH Common Fund Data Resources
Find proteins for Q9BY76 (Homo sapiens)
Explore Q9BY76 
Go to UniProtKB:  Q9BY76
PHAROS:  Q9BY76
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PLM (Subject of Investigation/LOI)
Query on PLM

Download Ideal Coordinates CCD File 
B [auth A]PALMITIC ACID
C16 H32 O2
IPCSVZSSVZVIGE-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.211 
  • R-Value Work: 0.194 
  • R-Value Observed: 0.195 
  • Space Group: C 2 2 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 132.568α = 90
b = 135.3β = 90
c = 39.509γ = 90
Software Package:
Software NamePurpose
HKL-3000data scaling
PHENIXrefinement
PHASERphasing
PHENIXmodel building
REFMACrefinement

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment  



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)United States5R42GM116283-03

Revision History  (Full details and data files)

  • Version 1.0: 2019-10-09
    Type: Initial release
  • Version 1.1: 2019-12-18
    Changes: Author supporting evidence