6TCB | pdb_00006tcb

Crystal structure of protein PA2723 from Pseudomonas aeruginosa PAO1

PDB DOI: https://doi.org/10.2210/pdb6TCB/pdb

Classification: UNKNOWN FUNCTION
Organism(s): Pseudomonas aeruginosa PAO1
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2019-11-05 Released: 2020-11-18
Deposition Author(s): Popp, M.A., Blankenfeldt, W.
Funding Organization(s): German Research Foundation

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.35 Å
R-Value Free:
0.165 (Depositor), 0.160 (DCC)
R-Value Work:
0.150 (Depositor), 0.160 (DCC)
R-Value Observed:
0.151 (Depositor)

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of protein PA2723 from Pseudomonas aeruginosa PAO1

Popp, M.A., Blankenfeldt, W.

To be published.

Macromolecule Content

Total Structure Weight: 21.14 kDa
Atom Count: 1,833
Modeled Residue Count: 188
Deposited Residue Count: 188
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein PA2723	A, B	94	Pseudomonas aeruginosa PAO1	Mutation(s): 0 Gene Names: PA2723
UniProt
Find proteins for Q9I0B9 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore Q9I0B9 Go to UniProtKB: Q9I0B9
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9I0B9
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
CA Query on CA Download Ideal Coordinates CCD File SDF format, chain C [auth B] MOL2 format, chain C [auth B] mmCIF format, chain C [auth B]	C [auth B]	CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N		Interactions Focus chain C [auth B] Interactions & Density Focus chain C [auth B]

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.35 Å
R-Value Free: 0.165 (Depositor), 0.160 (DCC)
R-Value Work: 0.150 (Depositor), 0.160 (DCC)
R-Value Observed: 0.151 (Depositor)

Space Group: P 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 33.004	α = 93.92
b = 33.028	β = 103.17
c = 41.338	γ = 118.33

Software Package:

Software Name	Purpose
PDB_EXTRACT	data extraction
PHENIX	refinement
SHELXE	model building
Coot	model building
Arcimboldo	phasing
Aimless	data scaling
XDS	data reduction

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2020-11-18

Deposition Author(s):

Blankenfeldt, W.

Funding Organization	Location	Grant Number
German Research Foundation	Germany	BL587/5-1

Revision History (Full details and data files)

Version 1.0: 2020-11-18
Type: Initial release
Version 1.1: 2024-05-15
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.