6T1P
ASR Alternansucrase in complex with isomaltononaose
- PDB DOI: https://doi.org/10.2210/pdb6T1P/pdb
- Classification: TRANSFERASE
- Organism(s): Leuconostoc mesenteroides
- Expression System: Escherichia coli
- Mutation(s): No 
- Deposited: 2019-10-04 Released: 2020-06-17 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.50 Å
- R-Value Free: 0.266 
- R-Value Work: 0.207 
- R-Value Observed: 0.209 
wwPDB Validation   3D Report Full Report
This is version 2.1 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Alternansucrase | 1,278 | Leuconostoc mesenteroides | Mutation(s): 0  Gene Names: asr EC: 2.4.1.140 | ||
UniProt | |||||
Find proteins for Q9RE05 (Leuconostoc mesenteroides) Explore Q9RE05  Go to UniProtKB:  Q9RE05 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9RE05 | ||||
Sequence AnnotationsExpand | |||||
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Oligosaccharides
Small Molecules
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CA (Subject of Investigation/LOI) Query on CA | E [auth A], F [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.50 Å
- R-Value Free: 0.266 
- R-Value Work: 0.207 
- R-Value Observed: 0.209 
- Space Group: P 21 21 21
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 100.567 | α = 90 |
b = 135.212 | β = 90 |
c = 237.201 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |
SCALA | data scaling |
PHASER | phasing |
Entry History 
Deposition Data
- Released Date: 2020-06-17  Deposition Author(s): Cioci, G., Molina, M., Moulis, C., Remaud-Simeon, M.
Revision History (Full details and data files)
- Version 1.0: 2020-06-17
Type: Initial release - Version 1.1: 2020-07-22
Changes: Database references - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Advisory, Atomic model, Data collection, Derived calculations, Structure summary - Version 2.1: 2024-01-24
Changes: Data collection, Database references, Refinement description, Structure summary