6T1O

Crystal structure of MLLT1 (ENL) YEATS domain in complexed with benzimidazole-amide derivative 6


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.202 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of MLLT1 (ENL) YEATS domain in complexed with benzimidazole-amide derivative 6

Chaikuad, A.Heidenreich, D.Moustakim, M.Arrowsmith, C.H.Edwards, A.M.Bountra, C.Fedorov, O.Brennan, P.E.Knapp, S.Structural Genomics Consortium (SGC)

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Protein ENL
A
154Homo sapiensMutation(s): 0 
Gene Names: MLLT1 (ENL, LTG19, YEATS1)
Find proteins for Q03111 (Homo sapiens)
Go to Gene View: MLLT1
Go to UniProtKB:  Q03111
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
M82
Query on M82

Download SDF File 
Download CCD File 
A
4-iodanyl-~{N}-[2-(piperidin-1-ylmethyl)-3~{H}-benzimidazol-5-yl]benzamide
C20 H21 I N4 O
BNHCQPUZQJMKRK-UHFFFAOYSA-N
 Ligand Interaction
EDO
Query on EDO

Download SDF File 
Download CCD File 
A
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.202 
  • Space Group: P 43 21 2
Unit Cell:
Length (Å)Angle (°)
a = 49.027α = 90.00
b = 49.027β = 90.00
c = 131.431γ = 90.00
Software Package:
Software NamePurpose
Aimlessdata scaling
XDSdata reduction
PDB_EXTRACTdata extraction
REFMACrefinement
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2019-11-06
    Type: Initial release