Macromolecule Content

Total Structure Weight: 58.33 kDa
Atom Count: 4103
Modelled Residue Count: 512
Deposited Residue Count: 522
Unique protein chains: 1

6SWM

selenol bound carbonic anhydrase I

DOI: 10.2210/pdb6SWM/pdb

Classification: LYASE
Organism(s): Homo sapiens
Expression System: Homo sapiens
Mutation(s): No

Deposited: 2019-09-22 Released: 2020-10-07
Deposition Author(s): Angeli, A., Ferraroni, M.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.77 Å
R-Value Free: 0.330
R-Value Work: 0.272
R-Value Observed: 0.275

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

selenol bound carbonic anhydrase I

Angeli, A., Ferraroni, M.

To be published.

Macromolecules

Find similar proteins by:

(by identity cutoff) | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Carbonic anhydrase 1	A, B	261	Homo sapiens	Mutation(s): 0 Gene Names: CA1 EC: 4.2.1.1
Find proteins for P00915 (Homo sapiens) Explore P00915 Go to UniProtKB: P00915
NIH Common Fund Data Resources
PHAROS: P00915 GTEx: ENSG00000133742
Protein Feature View Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
LVW Query on LVW Download Ideal Coordinates CCD File SDF format, chain D [A] SDF format, chain F [B] MOL2 format, chain D [A] MOL2 format, chain F [B]	A, B	(2~{R})-1-prop-2-enoxy-3-selanyl-propan-2-ol C₆ H₁₂ O₂ Se YQCUFGFATQCBJJ-ZCFIWIBFSA-N		Ligand Interaction
ZN Query on ZN Download Ideal Coordinates CCD File SDF format, chain C [A] SDF format, chain E [B] MOL2 format, chain C [A] MOL2 format, chain E [B]	A, B	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Ligand Interaction

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.77 Å
R-Value Free: 0.330
R-Value Work: 0.272
R-Value Observed: 0.275
Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 62.789	α = 90
b = 69.586	β = 90
c = 119.191	γ = 90

Software Package:

Software Name	Purpose
XSCALE	data scaling
REFMAC	refinement
PDB_EXTRACT	data extraction
XDS	data reduction
REFMAC	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Deposited Date: 2019-09-22
Released Date: 2020-10-07

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2020-10-07
Type: Initial release

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.