6S2D | pdb_00006s2d

Winter flounder 1 in SDS micelles

• PDB DOI: https://doi.org/10.2210/pdb6S2D/pdb
• BMRB: 34416

• Classification: ANTIMICROBIAL PROTEIN
• Organism(s): Pseudopleuronectes americanus
• Mutation(s): No 
• Membrane Protein: Yes  OPM


• Deposited: 2019-06-20 Released: 2020-07-15 
• Deposition Author(s): Clarke, M., Mason, A.J.
• Funding Organization(s): Not funded

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 1000 
• Conformers Submitted: 100 
• Selection Criteria: structures with the lowest energy 

Literature

Winter flounder 1 in SDS micelles

Clarke, M., Mason, A.J.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 2.49 kDa 
• Atom Count: 175 
• Modeled Residue Count: 24 
• Deposited Residue Count: 24 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Pleurocidin-like prepropolypeptide	A	24	Pseudopleuronectes americanus	Mutation(s): 0  Membrane Entity: Yes
UniProt
Find proteins for Q90VX5 (Pseudopleuronectes americanus) Explore Q90VX5  Go to UniProtKB:  Q90VX5

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 1000 
• Conformers Submitted: 100 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2020-07-15 
Deposition Author(s): Clarke, M., Mason, A.J.

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Funding Organization	Location	Grant Number
Not funded		--

Revision History  

• Version 1.0: 2020-07-15
  Type: Initial release
  
• Version 2.0: 2023-06-14
  Type: Coordinate replacement
  Reason: Sequence discrepancy
  Changes: Advisory, Atomic model, Author supporting evidence, Data collection, Database references, Derived calculations, Non-polymer description, Other, Polymer sequence, Source and taxonomy, Structure summary
• Version 2.1: 2024-06-19
  Changes: Data collection, Database references