6RJC

E.coli transketolase apoenzyme


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.05 Å
  • R-Value Free: 0.123 
  • R-Value Work: 0.104 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

E.coli transketolase apoenzyme

Dai, S.Sautner, V.Tittmann, K.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Transketolase 1
A, B
669Escherichia coli (strain K12)Mutation(s): 0 
Gene Names: tktA (tkt)
EC: 2.2.1.1
Find proteins for P27302 (Escherichia coli (strain K12))
Go to UniProtKB:  P27302
Small Molecules
Ligands 4 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NA
Query on NA

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Download CCD File 
A, B
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
GOL
Query on GOL

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Download CCD File 
A
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
CA
Query on CA

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Download CCD File 
A, B
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
EDO
Query on EDO

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Download CCD File 
A, B
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.05 Å
  • R-Value Free: 0.123 
  • R-Value Work: 0.104 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 89.905α = 90.00
b = 102.048β = 90.00
c = 132.933γ = 90.00
Software Package:
Software NamePurpose
PHENIXphasing
XDSdata reduction
XSCALEdata scaling
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
German Research FoundationGermanyFOR 1296/TP3

Revision History 

  • Version 1.0: 2019-09-11
    Type: Initial release