Download MendeleyCalpain small subunit 1, RNA-binding protein Hfq
Rizkallah, P.J., Cresser-Brown, J.O.(null) Acta Crystallogr Sect F Struct Biol Cryst Commun
6QLB
Calpain small subunit 1, RNA-binding protein Hfq
- DOI: 10.2210/pdb6QLB/pdb
- Classification: DNA BINDING PROTEIN
- Organism(s): Homo sapiens, Escherichia coli
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2019-01-31 Released: 2020-02-05
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.32 Å
- R-Value Free: 0.247
- R-Value Work: 0.201
- R-Value Observed: 0.203
wwPDB Validation 3D Report Full Report
Literature
Macromolecules
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(by identity cutoff) | Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Calpain small subunit 1 | A, B, C, D | 173 | Homo sapiens | Mutation(s): 0 Gene Names: CAPNS1, CAPN4, CAPNS |  |
Find proteins for P04632 (Homo sapiens) Explore P04632 Go to UniProtKB: P04632 | |||||
NIH Common Fund Data Resources | |||||
PHAROS: P04632 GTEx: ENSG00000126247 | |||||
Protein Feature ViewExpand | |||||
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Find similar proteins by:
(by identity cutoff) | Structure
Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| P4G Query on P4G | B, C | 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE C8 H18 O3 RRQYJINTUHWNHW-UHFFFAOYSA-N |  | Ligand Interaction | |
| GUN Query on GUN | A, E, F, H | GUANINE C5 H5 N5 O UYTPUPDQBNUYGX-UHFFFAOYSA-N |  | Ligand Interaction | |
| EDO Query on EDO | A | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | Ligand Interaction | |
| CA Query on CA | A, B, C, D | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.32 Å
- R-Value Free: 0.247
- R-Value Work: 0.201
- R-Value Observed: 0.203
- Space Group: P 21 3
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 147.607 | α = 90 |
| b = 147.607 | β = 90 |
| c = 147.607 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| xia2 | data reduction |
| Aimless | data scaling |
| PHASER | phasing |
| XDS | data reduction |
Entry History
Deposition Data
- Deposited Date: 2019-01-31
- Released Date: 2020-02-05 Deposition Author(s): Rizkallah, P.J., Cresser-Brown, J.O.
