6QD5

X-ray Structure of the Human Urea Channel SLC14A1/UT1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.398 Å
  • R-Value Free: 0.225 
  • R-Value Work: 0.175 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Urea transporter 1
A
367Homo sapiensMutation(s): 1 
Gene Names: SLC14A1 (HUT11, JK, RACH1, UT1, UTE)
Find proteins for Q13336 (Homo sapiens)
Go to Gene View: SLC14A1
Go to UniProtKB:  Q13336
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
Y01
Query on Y01

Download SDF File 
Download CCD File 
A
CHOLESTEROL HEMISUCCINATE
C31 H50 O4
WLNARFZDISHUGS-MIXBDBMTSA-N
 Ligand Interaction
PG4
Query on PG4

Download SDF File 
Download CCD File 
A
TETRAETHYLENE GLYCOL
C8 H18 O5
UWHCKJMYHZGTIT-UHFFFAOYSA-N
 Ligand Interaction
BOG
Query on BOG

Download SDF File 
Download CCD File 
A
B-OCTYLGLUCOSIDE
C14 H28 O6
HEGSGKPQLMEBJL-RKQHYHRCSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.398 Å
  • R-Value Free: 0.225 
  • R-Value Work: 0.175 
  • Space Group: P 63
Unit Cell:
Length (Å)Angle (°)
a = 112.331α = 90.00
b = 112.331β = 90.00
c = 87.940γ = 120.00
Software Package:
Software NamePurpose
PHENIXrefinement
PHENIXphasing
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
European Commission115766

Revision History 

  • Version 1.0: 2019-01-09
    Type: Initial release