6PQH

Crystal structure of Asparagine-tRNA ligase from Elizabethkingia sp. CCUG 26117


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.231 
  • R-Value Work: 0.181 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of Asparagine-tRNA ligase from Elizabethkingia sp. CCUG 26117

Abendroth, J.Lorimer, D.D.Horanyi, P.S.Edwards, T.E.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Asparagine--tRNA ligase
A, B, C, D
490Elizabethkingia anophelisMutation(s): 0 
Gene Names: asnS
EC: 6.1.1.22
Find proteins for X5KA67 (Elizabethkingia anophelis)
Go to UniProtKB:  X5KA67
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EDO
Query on EDO

Download SDF File 
Download CCD File 
A, C
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 67.400α = 90.00
b = 110.750β = 97.09
c = 137.180γ = 90.00
Software Package:
Software NamePurpose
Cootmodel building
XDSdata reduction
PHASERphasing
BUCCANEERmodel building
MR-Rosettaphasing
PHENIXmodel building
PDB_EXTRACTdata extraction
XSCALEdata scaling
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2019-07-31
    Type: Initial release