Structural insights into the activity and regulation of human Josephin-2
Grasty, K.C., Weeks, S.D., Loll, P.J.(2019) J Struct Biol 3: 100011
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
(2019) J Struct Biol 3: 100011
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Josephin-2 | 188 | Homo sapiens | Mutation(s): 0  Gene Names: JOSD2, SBBI54 EC: 3.4.19.12 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q8TAC2 (Homo sapiens) Explore Q8TAC2  Go to UniProtKB:  Q8TAC2 | |||||
PHAROS:  Q8TAC2 GTEx:  ENSG00000161677  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8TAC2 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Polyubiquitin-B | 75 | Homo sapiens | Mutation(s): 0  Gene Names: UBB | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P0CG47 (Homo sapiens) Explore P0CG47  Go to UniProtKB:  P0CG47 | |||||
PHAROS:  P0CG47 GTEx:  ENSG00000170315  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0CG47 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NEH Query on NEH | C [auth B] | ETHANAMINE C2 H7 N QUSNBJAOOMFDIB-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 102.12 | α = 90 |
b = 102.12 | β = 90 |
c = 92.2 | γ = 120 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
XDS | data reduction |
XSCALE | data scaling |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute of Neurological Disorders and Stroke (NIH/NINDS) | United States | R01NS065140 |