Macromolecule Content

Total Structure Weight: 77.82 kDa
Atom Count: 5,518
Modelled Residue Count: 624
Deposited Residue Count: 664
Unique protein chains: 1

6PFP

Crystal Structure of Amino Acids 1473-1536 of Human Beta Cardiac Myosin Fused to Gp7 and Eb1

PDB DOI: https://doi.org/10.2210/pdb6PFP/pdb

Classification: MOTOR PROTEIN
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2019-06-21 Released: 2020-06-24
Deposition Author(s): Andreas, M.P., Korkmaz, E.N., Kirsch, C.J., Hargreaves, M.D., Kieffer, D.J., Ajay, G., Cui, Q., Rayment, I.
Funding Organization(s): National Institutes of Health/National Heart, Lung, and Blood Institute (NIH/NHLBI)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.20 Å
R-Value Free: 0.245
R-Value Work: 0.194
R-Value Observed: 0.196

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

A Complete Model of the Cardiac Myosin Rod

Andreas, M.P., Korkmaz, E.N., Kirsch, C.J., Hargreaves, M., Kieffer, D.J., Ajay, G., Cui, Q., Rayment, I.

To be published.

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Myosin-7 fused to GP7 and EB1	A, B, C, D	166	Homo sapiens	Mutation(s): 0 Gene Names: MYH7, MYHCB
UniProt & NIH Common Fund Data Resources
Find proteins for P13848 (Bacillus phage phi29) Explore P13848 Go to UniProtKB: P13848
Find proteins for Q15691 (Homo sapiens) Explore Q15691 Go to UniProtKB: Q15691
PHAROS: Q15691
Find proteins for P12883 (Homo sapiens) Explore P12883 Go to UniProtKB: P12883
PHAROS: P12883
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Groups	P12883P13848Q15691
Protein Feature View Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
MPD Query on MPD Download Ideal Coordinates CCD File SDF format, chain F [auth A] SDF format, chain G [auth A] SDF format, chain H [auth B] SDF format, chain I [auth B] SDF format, chain K [auth C] SDF format, chain M [auth D] SDF format, chain E [auth A] SDF format, chain L [auth C] MOL2 format, chain F [auth A] MOL2 format, chain G [auth A] MOL2 format, chain H [auth B] MOL2 format, chain I [auth B] MOL2 format, chain K [auth C] MOL2 format, chain M [auth D] MOL2 format, chain E [auth A] MOL2 format, chain L [auth C]	E [auth A] F [auth A] G [auth A] H [auth B] I [auth B] E [auth A], F [auth A], G [auth A], H [auth B], I [auth B], K [auth C], L [auth C], M [auth D]	(4S)-2-METHYL-2,4-PENTANEDIOL C₆ H₁₄ O₂ SVTBMSDMJJWYQN-YFKPBYRVSA-N		Ligand Interaction
SO4 Query on SO4 Download Ideal Coordinates CCD File SDF format, chain J [auth B] MOL2 format, chain J [auth B]	J [auth B]	SULFATE ION O₄ S QAOWNCQODCNURD-UHFFFAOYSA-L		Ligand Interaction

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.20 Å
R-Value Free: 0.245
R-Value Work: 0.194
R-Value Observed: 0.196
Space Group: P 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 37.107	α = 81.79
b = 59.304	β = 86.42
c = 86.548	γ = 89.97

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHASER	phasing
Coot	model building
REFMAC	refinement
PDB_EXTRACT	data extraction

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2020-06-24

Deposition Author(s):

Hargreaves, M.D.

Funding Organization	Location	Grant Number
National Institutes of Health/National Heart, Lung, and Blood Institute (NIH/NHLBI)	United States	R21 HL111237

Revision History (Full details and data files)

Version 1.0: 2020-06-24
Type: Initial release

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.