6P7P

Structure of E. coli MS115-1 NucC, cAAA-bound form


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.665 Å
  • R-Value Free: 0.162 
  • R-Value Work: 0.142 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Structure and mechanism of a cyclic trinucleotide-activated bacterial endonuclease mediating bacteriophage immunity

Lau, R.K.Ye, Q.Birkholz, E.A.Berg, K.R.Patel, L.Mathews, I.T.Watrous, J.D.Ego, K.Whiteley, A.T.Lowey, B.Mekalanos, J.J.Kranzusch, P.J.Jain, M.Pogliano, J.Corbett, K.D.

(2020) Mol.Cell --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
E. coli MS115-1 NucC 2-241
A, B, C
243Escherichia coli MS 115-1Mutation(s): 1 
Find proteins for D7Y2H5 (Escherichia coli MS 115-1)
Go to UniProtKB:  D7Y2H5
Entity ID: 2
MoleculeChainsLengthOrganism
Cyclic tri-AMP (5'-3' linked)D,E,F3Escherichia coli MS 115-1
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CL
Query on CL

Download SDF File 
Download CCD File 
A
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.665 Å
  • R-Value Free: 0.162 
  • R-Value Work: 0.142 
  • Space Group: H 3 2
  • Diffraction Data DOI: 
    10.15785/SBGRID/666 SBGrid
Unit Cell:
Length (Å)Angle (°)
a = 131.592α = 90.00
b = 131.592β = 90.00
c = 252.109γ = 120.00
Software Package:
Software NamePurpose
PHENIXrefinement
PHASERphasing
Aimlessdata scaling
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2019-12-25
    Type: Initial release
  • Version 1.1: 2020-01-22
    Type: Database references