6OLU

RIAM RA-PH core structure in the P212121 space group

  • Classification: SIGNALING PROTEIN
  • Organism(s): Mus musculus
  • Expression System: Escherichia coli BL21(DE3)
  • Mutation(s): No 

  • Deposited: 2019-04-17 Released: 2020-04-22 
  • Deposition Author(s): Wu, J.
  • Funding Organization(s): National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.90 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.212 
  • R-Value Observed: 0.215 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Phosphorylation of RIAM by src promotes integrin activation by unmasking the PH domain of RIAM.

Cho, E.A.Zhang, P.Kumar, V.Kavalchuk, M.Zhang, H.Huang, Q.Duncan, J.S.Wu, J.

(2021) Structure 29: 320

  • DOI: https://doi.org/10.1016/j.str.2020.11.011
  • Primary Citation of Related Structures:  
    6O6H, 6OLU

  • PubMed Abstract: 

    Integrin activation controls cell adhesion, migration, invasion, and extracellular matrix remodeling. RIAM (RAP1-GTP-interacting adaptor molecule) is recruited by activated RAP1 to the plasma membrane (PM) to mediate integrin activation via an inside-out signaling pathway. This process requires the association of the pleckstrin homology (PH) domain of RIAM with the membrane PIP2. We identify a conserved intermolecular interface that masks the PIP2-binding site in the PH domains of RIAM. Our data indicate that phosphorylation of RIAM by Src family kinases disrupts this PH-mediated interface, unmasks the membrane PIP2-binding site, and promotes integrin activation. We further demonstrate that this process requires phosphorylation of Tyr267 and Tyr427 in the RIAM PH domain by Src. Our data reveal an unorthodox regulatory mechanism of small GTPase effector proteins by phosphorylation-dependent PM association of the PH domain and provide new insights into the link between Src kinases and integrin signaling.


  • Organizational Affiliation

    Molecular Therapeutics Program, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Amyloid beta A4 precursor protein-binding family B member 1-interacting protein262Mus musculusMutation(s): 0 
Gene Names: Apbb1ipPrel1
UniProt & NIH Common Fund Data Resources
Find proteins for Q8R5A3 (Mus musculus)
Explore Q8R5A3 
Go to UniProtKB:  Q8R5A3
IMPC:  MGI:1861354
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8R5A3
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.90 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.212 
  • R-Value Observed: 0.215 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 45.315α = 90
b = 80.624β = 90
c = 82.714γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling
MOLREPphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data

  • Released Date: 2020-04-22 
  • Deposition Author(s): Wu, J.

Funding OrganizationLocationGrant Number
National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)United StatesGM119560

Revision History  (Full details and data files)

  • Version 1.0: 2020-04-22
    Type: Initial release
  • Version 1.1: 2021-03-17
    Changes: Database references
  • Version 1.2: 2021-04-14
    Changes: Database references
  • Version 1.3: 2024-03-13
    Changes: Data collection, Database references, Refinement description