Download MendeleyStructural Intermediates of the Dimeric Kinesin Stepping Cycle Revealed by Cryo-EM
Cha, H.K., Debs, G., Liu, X., Liu, D., Sindelar, C.V.To be published.
6OJQ
Monomeric kinesin-1 motor domain in no-nucleotide state bound to GMPCPP-stabilized microtubule
- PDB DOI: 10.2210/pdb6OJQ/pdb
- EM Map EMD-20092: EMDB EMDataResource
- Classification: MOTOR PROTEIN
- Organism(s): Bos taurus, Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2019-04-12 Released: 2020-04-15
- Funding Organization(s): National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)
Experimental Data Snapshot
- Method: ELECTRON MICROSCOPY
- Resolution: 3.67 Å
- Aggregation State: FILAMENT
- Reconstruction Method: SINGLE PARTICLE
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Tubulin beta-2B chain | A [auth B] | 426 | Bos taurus | Mutation(s): 0 Gene Names: TUBB2B |  |
UniProt | |||||
Find proteins for Q6B856 (Bos taurus) Explore Q6B856 Go to UniProtKB: Q6B856 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q6B856 | ||||
Protein Feature ViewExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Tubulin alpha-1B chain | B [auth A] | 437 | Bos taurus | Mutation(s): 0 |  |
UniProt | |||||
Find proteins for P81947 (Bos taurus) Explore P81947 Go to UniProtKB: P81947 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P81947 | ||||
Protein Feature ViewExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 3 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Kinesin-1 heavy chain | C [auth K] | 317 | Homo sapiens | Mutation(s): 0 Gene Names: KIF5B, KNS, KNS1 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P33176 (Homo sapiens) Explore P33176 Go to UniProtKB: P33176 | |||||
PHAROS: P33176 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P33176 | ||||
Protein Feature ViewExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GTP Query on GTP | F [auth A] | GUANOSINE-5'-TRIPHOSPHATE C10 H16 N5 O14 P3 XKMLYUALXHKNFT-UUOKFMHZSA-N |  | Ligand Interaction | |
| G2P Query on G2P | D [auth B] | PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER C11 H18 N5 O13 P3 GXTIEXDFEKYVGY-KQYNXXCUSA-N |  | Ligand Interaction | |
| MG Query on MG | E [auth B], G [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: ELECTRON MICROSCOPY
- Resolution: 3.67 Å
- Aggregation State: FILAMENT
- Reconstruction Method: SINGLE PARTICLE
Entry History & Funding Information
Deposition Data
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI) | United States | R01 GM 110530-01 |
Revision History (Full details and data files)
- Version 1.0: 2020-04-15
Type: Initial release
