6OFE

Helical reconstruction of Type III Secretion System Needle filament mutant-PrgI S49A


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.61 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

A polymorphic helix of a Salmonella needle protein relays signals defining distinct steps in type III secretion.

Guo, E.Z.Desrosiers, D.C.Zalesak, J.Tolchard, J.Berbon, M.Habenstein, B.Marlovits, T.Loquet, A.Galan, J.E.

(2019) Plos Biol. 17: e3000351-e3000351

  • DOI: 10.1371/journal.pbio.3000351
  • Primary Citation of Related Structures:  

  • PubMed Abstract: 
  • Type III protein-secretion machines are essential for the interactions of many pathogenic or symbiotic bacterial species with their respective eukaryotic hosts. The core component of these machines is the injectisome, a multiprotein complex that medi ...

    Type III protein-secretion machines are essential for the interactions of many pathogenic or symbiotic bacterial species with their respective eukaryotic hosts. The core component of these machines is the injectisome, a multiprotein complex that mediates the selection of substrates, their passage through the bacterial envelope, and ultimately their delivery into eukaryotic target cells. The injectisome is composed of a large cytoplasmic complex or sorting platform, a multiring base embedded in the bacterial envelope, and a needle-like filament that protrudes several nanometers from the bacterial surface and is capped at its distal end by the tip complex. A characteristic feature of these machines is that their activity is stimulated by contact with target host cells. The sensing of target cells, thought to be mediated by the distal tip of the needle filament, generates an activating signal that must be transduced to the secretion machine by the needle filament. Here, through a multidisciplinary approach, including solid-state NMR (SSNMR) and cryo electron microscopy (cryo-EM) analyses, we have identified critical residues of the needle filament protein of a Salmonella Typhimurium type III secretion system that are involved in the regulation of the activity of the secretion machine. We found that mutations in the needle filament protein result in various specific phenotypes associated with different steps in the type III secretion process. More specifically, these studies reveal an important role for a polymorphic helix of the needle filament protein and the residues that line the lumen of its central channel in the control of type III secretion.


    Organizational Affiliation

    Institute of Chemistry and Biology of Membranes and Nano-objects, CBMN-CNRS Université de Bordeaux, Pessac, France.,Center for Structural Systems Biology (CSSB), University Medical Center Hamburg-Eppendorf (UKE) and German Electron Synchrotron Centre (DESY), Hamburg, Germany.,Research Institute of Molecular Pathology (IMP), Vienna Biocenter (VBC), Vienna, Austria.,Institute of Molecular Biotechnology (IMBA), Vienna Biocenter (VBC), Vienna, Austria.,Department of Microbial Pathogenesis, Yale University School of Medicine, New Haven, Connecticut, United States of America.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Protein PrgI
P, Q, R, S, T, K, L, M, N, O, F, G, H, I, J, D, A, B, C, E
83Salmonella typhimurium (strain SL1344)Mutation(s): 1 
Gene Names: prgI
Find proteins for A0A0H3NF82 (Salmonella typhimurium (strain SL1344))
Go to UniProtKB:  A0A0H3NF82
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.61 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 
Software Package:
Software NamePurpose
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2019-03-29 
  • Released Date: 2019-07-10 
  • Deposition Author(s): Guo, E.Z., Galan, J.E.

Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious DiseasesUnited StatesAI030492

Revision History 

  • Version 1.0: 2019-07-10
    Type: Initial release