Download MendeleyThe structure of GH32 from Bifidobacteium adolescentis
Lima, M.Z.T., Muniz, J.R.C.To be published.
6NUM
The structure of GH32 from Bifidobacteium adolescentis
- PDB DOI: https://doi.org/10.2210/pdb6NUM/pdb
- Classification: HYDROLASE
- Organism(s): Bifidobacterium adolescentis
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2019-02-01 Released: 2020-02-05
- Funding Organization(s): Sao Paulo Research Foundation (FAPESP), Brazilian National Council for Scientific and Technological Development (CNPq)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.270
- R-Value Work: 0.235
- R-Value Observed: 0.237
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Beta-fructofuranosidase | A | 518 | Bifidobacterium adolescentis | Mutation(s): 0 Gene Names: B0703_1339 |  |
UniProt | |||||
Find proteins for A1A2J8 (Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a)) Explore A1A2J8 Go to UniProtKB: A1A2J8 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A1A2J8 | ||||
Protein Feature ViewExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.270
- R-Value Work: 0.235
- R-Value Observed: 0.237
- Space Group: P 31 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 88.63 | α = 90 |
| b = 88.63 | β = 90 |
| c = 114.57 | γ = 120 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| TRUNCATE | data reduction |
| SAINT | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2020-02-05 Deposition Author(s): Lima, M.Z.T., Muniz, J.R.C.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Sao Paulo Research Foundation (FAPESP) | Brazil | 2017/16291-5 |
| Brazilian National Council for Scientific and Technological Development (CNPq) | Brazil | 309767/2015-6 |
| Brazilian National Council for Scientific and Technological Development (CNPq) | Brazil | 486546/2013-6 |
| Brazilian National Council for Scientific and Technological Development (CNPq) | Brazil | 308865/2018-9 |
Revision History (Full details and data files)
- Version 1.0: 2020-02-05
Type: Initial release
