6MYG | pdb_00006myg

Mouse Gamma S Crystallin L16 Octamer

PDB DOI: https://doi.org/10.2210/pdb6MYG/pdb

Classification: PROTEIN BINDING
Organism(s): Mus musculus
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2018-11-01 Released: 2018-11-14
Deposition Author(s): Sagar, V., Wistow, G.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.92 Å
R-Value Free:
0.284 (Depositor), 0.290 (DCC)
R-Value Work:
0.205 (Depositor), 0.210 (DCC)
R-Value Observed:
0.209 (Depositor)

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Disulfides, domain swaps and disorder in a gamma-crystallin: A model for mechanisms of aggregation in globular proteins.

Sagar, V., Wistow, G.J.

To be published.

Macromolecule Content

Total Structure Weight: 83.45 kDa
Atom Count: 5,503
Modeled Residue Count: 700
Deposited Residue Count: 712
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Gamma-crystallin S	A [auth B], B [auth A], C, D	178	Mus musculus	Mutation(s): 0 Gene Names: Crygs
UniProt & NIH Common Fund Data Resources
Find proteins for O35486 (Mus musculus) Explore O35486 Go to UniProtKB: O35486
IMPC: MGI:1298216
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	O35486
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.92 Å
R-Value Free: 0.284 (Depositor), 0.290 (DCC)
R-Value Work: 0.205 (Depositor), 0.210 (DCC)
R-Value Observed: 0.209 (Depositor)

Space Group: P 2₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 61.095	α = 90
b = 77.591	β = 90
c = 154.052	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHENIX	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2018-11-14

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2018-11-14
Type: Initial release
Version 1.1: 2024-11-13
Changes: Data collection, Database references, Structure summary

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.