6MWE

CRYSTAL STRUCTURE OF TIE2 IN COMPLEX WITH DECIPERA COMPOUND DP1919


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.166 
  • R-Value Work: 0.148 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

The Selective Tie2 Inhibitor Rebastinib Blocks Recruitment and Function of Tie2

Harney, A.S.Karagiannis, G.S.Pignatelli, J.Smith, B.D.Kadioglu, E.Wise, S.C.Hood, M.M.Kaufman, M.D.Leary, C.B.Lu, W.P.Al-Ani, G.Chen, X.Entenberg, D.Oktay, M.H.Wang, Y.Chun, L.De Palma, M.Jones, J.G.Flynn, D.L.Condeelis, J.S.

(2017) Mol. Cancer Ther. 16: 2486-2501


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Angiopoietin-1 receptor
A, B
317Homo sapiensMutation(s): 0 
Gene Names: TEK (TIE2, VMCM, VMCM1)
EC: 2.7.10.1
Find proteins for Q02763 (Homo sapiens)
Go to Gene View: TEK
Go to UniProtKB:  Q02763
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
919
Query on 919

Download SDF File 
Download CCD File 
A, B
4-[4-({[3-tert-butyl-1-(quinolin-6-yl)-1H-pyrazol-5-yl]carbamoyl}amino)-3-fluorophenoxy]-N-methylpyridine-2-carboxamide
DCC-2036
C30 H28 F N7 O3
WVXNSAVVKYZVOE-UHFFFAOYSA-N
 Ligand Interaction
SO4
Query on SO4

Download SDF File 
Download CCD File 
A, B
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.166 
  • R-Value Work: 0.148 
  • Space Group: P 41
Unit Cell:
Length (Å)Angle (°)
a = 63.810α = 90.00
b = 63.810β = 90.00
c = 177.450γ = 90.00
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
XSCALEdata scaling
Cootmodel building
REFMACrefinement
PHASERphasing
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2018-11-21
    Type: Initial release