6MVU

Structure of a bacterial ALDH16 active site mutant C295A complexed with p-nitrophenylacetate


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.488 Å
  • R-Value Free: 0.216 
  • R-Value Work: 0.192 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal Structure of Aldehyde Dehydrogenase 16 Reveals Trans-Hierarchical Structural Similarity and a New Dimer.

Liu, L.K.Tanner, J.J.

(2019) J. Mol. Biol. 431: 524-541


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Aldehyde dehydrogenase
A, B
767Loktanella sp. 3ANDIMAR09Mutation(s): 1 
Find proteins for A0A0Q3EUQ3 (Loktanella sp. 3ANDIMAR09)
Go to UniProtKB:  A0A0Q3EUQ3
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download SDF File 
Download CCD File 
A, B
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
GOL
Query on GOL

Download SDF File 
Download CCD File 
A, B
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
K4V
Query on K4V

Download SDF File 
Download CCD File 
A, B
4-nitrophenyl acetate
P-NITROPHENYL ACETATE
C8 H7 N O4
QAUUDNIGJSLPSX-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.488 Å
  • R-Value Free: 0.216 
  • R-Value Work: 0.192 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 79.383α = 90.00
b = 119.623β = 90.00
c = 158.670γ = 90.00
Software Package:
Software NamePurpose
Aimlessdata scaling
PDB_EXTRACTdata extraction
XDSdata reduction
PHENIXrefinement
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2018-10-28 
  • Released Date: 2018-12-26 
  • Deposition Author(s): Tanner, J.J., Liu, L.

Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical SciencesUnited StatesR01GM093123

Revision History 

  • Version 1.0: 2018-12-26
    Type: Initial release
  • Version 1.1: 2019-02-13
    Type: Data collection, Database references