6MSC

Novel, potent, selective and brain penetrant phosphodiesterase 10A inhibitors


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.36 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.206 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Novel, potent, selective, and brain penetrant phosphodiesterase 10A inhibitors.

Geneste, H.Drescher, K.Jakob, C.Laplanche, L.Ochse, M.Torrent, M.

(2019) Bioorg. Med. Chem. Lett. 29: 406-412


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A
A, B
332Homo sapiensMutation(s): 0 
Gene Names: PDE10A
EC: 3.1.4.17, 3.1.4.35
Find proteins for Q9Y233 (Homo sapiens)
Go to Gene View: PDE10A
Go to UniProtKB:  Q9Y233
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
JY7
Query on JY7

Download SDF File 
Download CCD File 
A, B
8-fluoro-6-methoxy-3-methyl-1-(3-methylpyridin-4-yl)-3H-pyrazolo[3,4-c]cinnoline
C17 H14 F N5 O
BEHIYTQDLXFKJV-UHFFFAOYSA-N
 Ligand Interaction
ZN
Query on ZN

Download SDF File 
Download CCD File 
A, B
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
MG
Query on MG

Download SDF File 
Download CCD File 
A, B
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.36 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.206 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 50.530α = 90.00
b = 81.810β = 90.00
c = 159.400γ = 90.00
Software Package:
Software NamePurpose
XDSdata scaling
PHASERphasing
BUSTERrefinement
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2018-10-16 
  • Released Date: 2019-01-09 
  • Deposition Author(s): Jakob, C.G.

Revision History 

  • Version 1.0: 2019-01-09
    Type: Initial release
  • Version 1.1: 2019-02-06
    Type: Data collection, Database references