Biological Assembly 1  

 3D View: Structure

Global Symmetry: Cyclic - C4  (3D View)
Global Stoichiometry: Homo 4-mer - A4 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: gel filtration

Macromolecule Content

• Total Structure Weight: 379.44 kDa 
• Atom Count: 17900 
• Residue Count: 2452 
• Unique protein chains: 1

6MHW

Structure of human TRPV3 in the presence of 2-APB in C2 symmetry (1)

• DOI: 10.2210/pdb6MHW/pdb
• EMDataResource: EMD-9120

• Classification: TRANSPORT PROTEIN
• Organism(s): Homo sapiens
• Expression System: Spodoptera frugiperda
• Mutation(s): No 


• Deposited: 2018-09-18 Released: 2018-10-03 
• Deposition Author(s): Zubcevic, L., Herzik, M.A., Wu, M., Borschel, W.F., Hirschi, M., Song, A., Lander, G.C., Lee, S.Y.
• Funding Organization(s): National Institutes of Health/National Institute of Neurological Disorders and Stroke (NIH/NINDS), National Institutes of Health/National Institute of Biomedical Imaging and Bioengineering (NIH/NIBIB), National Institutes of Health/National Institute of Arthritis and Musculoskeletal and Skin Diseases (NIH/NIAMS)

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Experimental Data Snapshot

• Method: ELECTRON MICROSCOPY
• Resolution: 4.00 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Literature

Conformational ensemble of the human TRPV3 ion channel.

Zubcevic, L., Herzik Jr., M.A., Wu, M., Borschel, W.F., Hirschi, M., Song, A.S., Lander, G.C., Lee, S.Y.

(2018) Nat Commun 9: 4773-4773

• PubMed: 30429472 
• DOI: 10.1038/s41467-018-07117-w
• Structures With Same Primary Citation


• PubMed Abstract: 
  

Transient receptor potential vanilloid channel 3 (TRPV3), a member of the thermosensitive TRP (thermoTRPV) channels, is activated by warm temperatures and serves as a key regulator of normal skin physiology through the release of pro-inflammatory messengers. Mutations in trpv3 have been identified as the cause of the congenital skin disorder, Olmsted syndrome. Unlike other members of the thermoTRPV channel family, TRPV3 sensitizes upon repeated stimulation, yet a lack of structural information about the channel precludes a molecular-level understanding of TRPV3 sensitization and gating. Here, we present the cryo-electron microscopy structures of apo and sensitized human TRPV3, as well as several structures of TRPV3 in the presence of the common thermoTRPV agonist 2-aminoethoxydiphenyl borate (2-APB). Our results show α-to-π-helix transitions in the S6 during sensitization, and suggest a critical role for the S4-S5 linker π-helix during ligand-dependent gating.

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Organizational Affiliation: 

Department of Biochemistry, Duke University Medical Center, Durham, 27710, NC, USA. [e-mail].

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
Transient receptor potential cation channel subfamily V member 3	A, B, C, D	826	Homo sapiens	Mutation(s): 0  Gene Names: TRPV3
Find proteins for Q8NET8 (Homo sapiens) Go to UniProtKB:  Q8NET8
NIH Common Fund Data Resources
PHAROS  Q8NET8 GTEx  ENSG00000167723

Experimental Data & Validation

Experimental Data

• Method: ELECTRON MICROSCOPY
• Resolution: 4.00 Å
• Aggregation State: PARTICLE 
• Reconstruction Method: SINGLE PARTICLE 

Structure Validation

Entry History & Funding Information

Deposition Data

• Deposited Date: 2018-09-18 
• Released Date: 2018-10-03 
Deposition Author(s): Zubcevic, L., Herzik, M.A., Wu, M., Borschel, W.F., Hirschi, M., Song, A., Lander, G.C., Lee, S.Y.

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Funding Organization	Location	Grant Number
National Institutes of Health/National Institute of Neurological Disorders and Stroke (NIH/NINDS)	United States	R35NS097241
National Institutes of Health/National Institute of Biomedical Imaging and Bioengineering (NIH/NIBIB)	United States	DP2EB020402
National Institutes of Health/National Institute of Arthritis and Musculoskeletal and Skin Diseases (NIH/NIAMS)	United States	R21AR072910

Revision History 

• Version 1.0: 2018-10-03
  Type: Initial release
  
• Version 1.1: 2018-11-28
  Changes: Data collection, Database references
• Version 1.2: 2019-12-11
  Changes: Author supporting evidence