6MGR

Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Campylobacter jejuni in the complex with inhibitor Oxanosine monophosphate

PDB DOI: 10.2210/pdb6MGR/pdb

Classification: OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR
Organism(s): Campylobacter jejuni
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2018-09-14 Released: 2018-10-24
Deposition Author(s): Kim, Y., Maltseva, N., Yu, R., Hedstrom, L., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.97 Å
R-Value Free: 0.202
R-Value Work: 0.173
R-Value Observed: 0.175

wwPDB Validation 3D Report Full Report

Ligand Structure Quality Assessment

This is version 1.1 of the entry. See complete history.

Literature

Crystal Structure of the Catalytic Domain of the Inosine Monophosphate Dehydrogenase from Campylobacter jejuni in the complex with inhibitor Oxanosine Monophosphate

Kim, Y., Maltseva, N., Yu, R., Hedstrom, L., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)

To be published.

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Inosine monophosphate dehydrogenase	A, B, C, D	385	Campylobacter jejuni	Mutation(s): 0 Gene Names: C9J79_08320 EC: 1.1.1.205
UniProt
Find proteins for A0A2R4D3F6 (Campylobacter jejuni) Explore A0A2R4D3F6 Go to UniProtKB: A0A2R4D3F6
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A2R4D3F6
Protein Feature View Expand
Reference Sequence

Small Molecules

Ligands 5 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
JQS Query on JQS Download Ideal Coordinates CCD File SDF format, chain E [auth A] SDF format, chain IA [auth D] SDF format, chain O [auth B] SDF format, chain Z [auth C] MOL2 format, chain E [auth A] MOL2 format, chain IA [auth D] MOL2 format, chain O [auth B] MOL2 format, chain Z [auth C]	E [auth A], IA [auth D], O [auth B], Z [auth C]	5-[(Z)-(aminomethylidene)amino]-1-(5-O-phosphono-beta-D-ribofuranosyl)-1H-imidazole-4-carboxylic acid C₁₀ H₁₅ N₄ O₉ P CEVAZLJDKSQTJT-FJGDRVTGSA-N		Ligand Interaction
MPD Query on MPD Download Ideal Coordinates CCD File SDF format, chain GA [auth C] SDF format, chain L [auth A] SDF format, chain X [auth B] MOL2 format, chain GA [auth C] MOL2 format, chain L [auth A] MOL2 format, chain X [auth B]	GA [auth C], L [auth A], X [auth B]	(4S)-2-METHYL-2,4-PENTANEDIOL C₆ H₁₄ O₂ SVTBMSDMJJWYQN-YFKPBYRVSA-N		Ligand Interaction
SO4 Query on SO4 Download Ideal Coordinates CCD File SDF format, chain CA [auth C] SDF format, chain DA [auth C] SDF format, chain EA [auth C] SDF format, chain FA [auth C] SDF format, chain G [auth A] SDF format, chain JA [auth D] SDF format, chain KA [auth D] SDF format, chain LA [auth D] SDF format, chain Q [auth B] SDF format, chain QA [auth D] SDF format, chain S [auth B] SDF format, chain T [auth B] SDF format, chain V [auth B] SDF format, chain AA [auth C] SDF format, chain F [auth A] SDF format, chain P [auth B] SDF format, chain R [auth B] MOL2 format, chain CA [auth C] MOL2 format, chain DA [auth C] MOL2 format, chain EA [auth C] MOL2 format, chain FA [auth C] MOL2 format, chain G [auth A] MOL2 format, chain JA [auth D] MOL2 format, chain KA [auth D] MOL2 format, chain LA [auth D] MOL2 format, chain Q [auth B] MOL2 format, chain QA [auth D] MOL2 format, chain S [auth B] MOL2 format, chain T [auth B] MOL2 format, chain V [auth B] MOL2 format, chain AA [auth C] MOL2 format, chain F [auth A] MOL2 format, chain P [auth B] MOL2 format, chain R [auth B]	AA [auth C], CA [auth C], DA [auth C], EA [auth C], F [auth A], AA [auth C], CA [auth C], DA [auth C], EA [auth C], F [auth A], FA [auth C], G [auth A], JA [auth D], KA [auth D], LA [auth D], P [auth B], Q [auth B], QA [auth D], R [auth B], S [auth B], T [auth B], V [auth B]	SULFATE ION O₄ S QAOWNCQODCNURD-UHFFFAOYSA-L		Ligand Interaction
K Query on K Download Ideal Coordinates CCD File SDF format, chain HA [auth D] SDF format, chain M [auth A] SDF format, chain N [auth B] SDF format, chain U [auth B] SDF format, chain Y [auth C] MOL2 format, chain HA [auth D] MOL2 format, chain M [auth A] MOL2 format, chain N [auth B] MOL2 format, chain U [auth B] MOL2 format, chain Y [auth C]	HA [auth D], M [auth A], N [auth B], U [auth B], Y [auth C]	POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N		Ligand Interaction
CL Query on CL Download Ideal Coordinates CCD File SDF format, chain BA [auth C] SDF format, chain H [auth A] SDF format, chain I [auth A] SDF format, chain K [auth A] SDF format, chain MA [auth D] SDF format, chain OA [auth D] SDF format, chain PA [auth D] SDF format, chain W [auth B] SDF format, chain J [auth A] SDF format, chain NA [auth D] MOL2 format, chain BA [auth C] MOL2 format, chain H [auth A] MOL2 format, chain I [auth A] MOL2 format, chain K [auth A] MOL2 format, chain MA [auth D] MOL2 format, chain OA [auth D] MOL2 format, chain PA [auth D] MOL2 format, chain W [auth B] MOL2 format, chain J [auth A] MOL2 format, chain NA [auth D]	BA [auth C], H [auth A], I [auth A], J [auth A], K [auth A], BA [auth C], H [auth A], I [auth A], J [auth A], K [auth A], MA [auth D], NA [auth D], OA [auth D], PA [auth D], W [auth B]	CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M		Ligand Interaction