6MFQ

Crystal structure of a PMS2 variant


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.221 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Biochemical and structural characterization of two variants of uncertain significance in the PMS2 gene.

D'Arcy, B.M.Blount, J.Prakash, A.

(2019) Hum. Mutat. 40: 458-471


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Mismatch repair endonuclease PMS2
A, B
369Homo sapiensMutation(s): 0 
Gene Names: PMS2 (PMSL2)
EC: 3.1.-.-
Find proteins for P54278 (Homo sapiens)
Go to Gene View: PMS2
Go to UniProtKB:  P54278
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.221 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 74.989α = 90.00
b = 74.962β = 90.00
c = 134.399γ = 90.00
Software Package:
Software NamePurpose
SADABSdata scaling
PHENIXrefinement
PDB_EXTRACTdata extraction
SAINTdata reduction
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of Environmental Health SciencesUnited StatesR00ES024417-04

Revision History 

  • Version 1.0: 2019-02-06
    Type: Initial release
  • Version 1.1: 2019-03-20
    Type: Data collection, Database references