Biological Assembly 1  

 3D View: Structure | Electron Density | Ligand Interaction

Standalone Viewers  
Protein Workshop | Ligand Explorer

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: gel filtration

Macromolecule Content

• Total Structure Weight: 33612.52 
• Atom Count: 2169 
• Residue Count: 289 
• Unique protein chains: 1

6M9H

JAK2 JH2 in complex with diaminopyrimidine JAK040

• DOI: 10.2210/pdb6M9H/pdb

• Classification: TRANSFERASE/TRANSFERASE INHIBITOR
• Organism(s): Homo sapiens
• Expression System: Spodoptera frugiperda
• Mutation(s): 3 


• Deposited: 2018-08-23 Released: 2018-09-05 
• Deposition Author(s): Puleo, D.E., Schlessinger, J., Jorgensen, W.L.
• Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences; Other private 

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.79 Å
• R-Value Free: 0.206 
• R-Value Work: 0.171 

Literature

JAK2 JH2 Binders

Puleo, D.E., Schlessinger, J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
Tyrosine-protein kinase JAK2	A	289	Homo sapiens	Mutation(s): 3  Gene Names: JAK2 EC: 2.7.10.2
Find proteins for O60674 (Homo sapiens) Go to Gene View: JAK2 Go to UniProtKB:  O60674

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram & Interactions
J9D	A	4-({4-amino-6-[4-(2-hydroxyethyl)-1H-imidazol-1-yl]pyrimidin-2-yl}amino)benzonitrile C16 H15 N7 O OVFXXQZOTWTSJA-UHFFFAOYSA-N
GOL	A	GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N
DMS	A	DIMETHYL SULFOXIDE C2 H6 O S IAZDPXIOMUYVGZ-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.79 Å
• R-Value Free: 0.206 
• R-Value Work: 0.171 
• Space Group: P 1 2₁ 1

Unit Cell:

Length (Å)	Angle (°)
a = 44.298	α = 90.00
b = 57.600	β = 110.17
c = 60.691	γ = 90.00

Software Package:

Software Name	Purpose
PHASER	phasing
PHENIX	refinement
XDS	data reduction
XDS	data scaling

Structure Validation

Entry History & Funding Information

Deposition Data

• Deposited Date: 2018-08-23 
• Released Date: 2018-09-05 
• Deposition Author(s): Puleo, D.E., Schlessinger, J., Jorgensen, W.L.

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Funding Organization	Location	Grant Number
National Institutes of Health/National Institute of General Medical Sciences	United States	GM007324
Other private	United States	YG-003-13
National Institutes of Health/National Institute of General Medical Sciences	United States	GM32136

Revision History 

• Version 1.0: 2018-09-05
  Type: Initial release
• Version 1.1: 2018-11-21
  Type: Author supporting evidence, Data collection, Structure summary