6LNZ

NMR solution structure of VEGF G-quadruplex bound a non-planar cyclometalated-carbene platinum(II) complex

  • Classification: DNA
  • Organism(s): Homo sapiens
  • Mutation(s): No 

  • Deposited: 2020-01-02 Released: 2021-01-13 
  • Deposition Author(s): Liu, W., Zhu, B.Z., Mao, Z.W.
  • Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 15 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation   3D Report Full Report



Literature

Adaptive Binding, Solution Structure and Functional Regulation of VEGF G-quadruplex Bound the Non-planar Platinum(II) Complex

Zhu, B.C.Liu, W.Mao, Z.W.

To be published.

Macromolecules
Find similar nucleic acids by: 
(by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsLengthOrganismImage
DNA (5'-D(*CP*GP*GP*GP*GP*CP*GP*GP*GP*CP*CP*TP*TP*GP*GP*GP*CP*GP*GP*GP*GP*T)-3')A22Homo sapiens
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EL9
Query on EL9

Download Ideal Coordinates CCD File 
A
cyclometalated-carbene platinum(II) complex
C20 H15 F2 N4 Pt
MSOPGFNQFJYXDN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 15 
  • Selection Criteria: structures with the lowest energy 
  • OLDERADO: 6LNZ Olderado

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China21837006

Revision History 

  • Version 1.0: 2021-01-13
    Type: Initial release