6L7N | pdb_00006l7n

crystal structure of a FUNGAL LIPASES

• PDB DOI: https://doi.org/10.2210/pdb6L7N/pdb

• Classification: HYDROLASE
• Organism(s): Penicillium roqueforti FM164
• Expression System: Pichia kudriavzevii
• Mutation(s): No 
• Membrane Protein: Yes  OPM


• Deposited: 2019-11-01 Released: 2020-11-04 
• Deposition Author(s): Wang, Y.H., Yuan, H., Lan, D.M., Liu, X.H.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.80 Å
• R-Value Free: 
  0.228 (Depositor), 0.230 (DCC) 
• R-Value Work: 
  0.176 (Depositor), 0.180 (DCC) 
• R-Value Observed: 
  0.179 (Depositor) 

Starting Model: experimental

Literature

crystal structure of a FUNGAL LIPASES

Wang, Y.H., Yuan, H., Lan, D.M., Liu, X.H.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: gel filtration

Macromolecule Content 

• Total Structure Weight: 30.81 kDa 
• Atom Count: 2,360 
• Modeled Residue Count: 270 
• Deposited Residue Count: 283 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Lipase, class 3	A	283	Penicillium roqueforti FM164	Mutation(s): 0  Gene Names: PROQFM164_S02g000904 Membrane Entity: Yes
UniProt
Find proteins for W6Q990 (Penicillium roqueforti (strain FM164)) Explore W6Q990  Go to UniProtKB:  W6Q990

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.80 Å
• R-Value Free:  0.228 (Depositor), 0.230 (DCC) 
• R-Value Work:  0.176 (Depositor), 0.180 (DCC) 
• R-Value Observed: 0.179 (Depositor) 

Space Group: P 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 33.247	α = 109.22
b = 44.928	β = 101.36
c = 46.025	γ = 112.1

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-3000	data reduction
HKL-3000	data scaling
MOLREP	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2020-11-04 
Deposition Author(s): Wang, Y.H., Yuan, H., Lan, D.M., Liu, X.H.

Revision History  

• Version 1.0: 2020-11-04
  Type: Initial release
  
• Version 1.1: 2023-11-22
  Changes: Data collection, Database references, Refinement description
• Version 1.2: 2024-11-13
  Changes: Structure summary