6KYU

Complex assembly, crystallization and preliminary X-ray crystallographic studies of duck MHC class I molecule


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Free: 0.188 
  • R-Value Work: 0.166 

wwPDB Validation   3D Report Full Report



Literature

Complex assembly, crystallization and preliminary X-ray crystallographic analysis of the duck pAnpl-UAA

Liu, Z.X.Zhang, N.Z.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
MHC class I antigenA271Anas platyrhynchosMutation(s): 0 
Gene Names: Anpl-UAA
Find proteins for A0A2Z4U0R6 (Anas platyrhynchos)
Explore A0A2Z4U0R6 
Go to UniProtKB:  A0A2Z4U0R6
Protein Feature View
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
Beta-2-microglobulinB101Anas platyrhynchosMutation(s): 0 
Gene Names: B2M
Find proteins for U3I3I3 (Anas platyrhynchos platyrhynchos)
Explore U3I3I3 
Go to UniProtKB:  U3I3I3
Protein Feature View
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  • Reference Sequence
  • Find similar proteins by:  Sequence   |   Structure
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetailsImage
peptideC9Duck Tembusu virusMutation(s): 0 
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Free: 0.188 
  • R-Value Work: 0.166 
  • Space Group: P 62
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 82.468α = 90
b = 82.468β = 90
c = 112.507γ = 120
Software Package:
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling
PHENIXphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Basic Research Program of China (973 Program)China2016YFD0500106

Revision History 

  • Version 1.0: 2020-09-23
    Type: Initial release