6KW5

The ClassC RSC-Nucleosome Complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 10.1 Å
  • Aggregation State: CELL 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report



Literature

Structure of the RSC complex bound to the nucleosome

Ye, Y.P.Wu, H.Chen, K.J.Verma, N.Cairns, B.Gao, N.Chen, Z.C.

To be published.

Macromolecules

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Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Chromatin structure-remodeling complex subunit RSC7F435Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: NPL6RSC7YMR091CYM9582.16C
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Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
Chromatin structure-remodeling complex protein RSC8DH557Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: RSC8SWH3YFR037C
Find proteins for P43609 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 3
MoleculeChainsSequence LengthOrganismDetailsImage
Chromatin structure-remodeling complex subunit RSC9M581Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: RSC9YML127WYM4987.08
Find proteins for Q03124 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 4
MoleculeChainsSequence LengthOrganismDetailsImage
Chromatin structure-remodeling complex protein RSC6I483Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: RSC6YCR052WYCR52W
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Entity ID: 5
MoleculeChainsSequence LengthOrganismDetailsImage
Chromatin structure-remodeling complex subunit SFH1G426Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: SFH1YLR321CL8543.4
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Entity ID: 6
MoleculeChainsSequence LengthOrganismDetailsImage
Chromatin structure-remodeling complex protein RSC58A502Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: RSC58YLR033W
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Entity ID: 7
MoleculeChainsSequence LengthOrganismDetailsImage
Nuclear protein STH1/NPS1JPQ1359Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: STH1NPS1YIL126W
EC: 3.6.4.12
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Entity ID: 8
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High temperature lethal protein 1E78Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: HTL1DRT1YCR020W-B
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Entity ID: 9
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Chromatin structure-remodeling complex protein RSC30C883Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: RSC30YHR056C
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Entity ID: 10
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Chromatin structure-remodeling complex protein RSC3K885Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: RSC3YDR303CD9740.13
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Entity ID: 11
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Chromatin structure-remodeling complex subunit RSC4X625Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: RSC4YKR008WYK107
Find proteins for Q02206 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 12
MoleculeChainsSequence LengthOrganismDetailsImage
Chromatin structure-remodeling complex subunit RSC2L889Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: RSC2YLR357WL9638.1
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Entity ID: 13
MoleculeChainsSequence LengthOrganismDetailsImage
Histone H4SW103Xenopus laevisMutation(s): 0 
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Entity ID: 14
MoleculeChainsSequence LengthOrganismDetailsImage
Actin-related protein 7f477Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: ARP7SWP61YPR034WYP9367.14
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Entity ID: 15
MoleculeChainsSequence LengthOrganismDetailsImage
Regulator of Ty1 transposition protein 102h157Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: RTT102YGR275WG9378
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Entity ID: 16
MoleculeChainsSequence LengthOrganismDetailsImage
Histone H3.2RV136Xenopus laevisMutation(s): 0 
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Entity ID: 17
MoleculeChainsSequence LengthOrganismDetailsImage
Histone H2AOT130Xenopus laevisMutation(s): 0 
Gene Names: hist1h2ajLOC494591XELAEV_18003602mgh2ac14.Lh2ac14
Find proteins for Q6AZJ8 (Xenopus laevis)
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Entity ID: 18
MoleculeChainsSequence LengthOrganismDetailsImage
Histone H4UY126Xenopus laevisMutation(s): 0 
Gene Names: XELAEV_18028549mg
Find proteins for A0A1L8G0X3 (Xenopus laevis)
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Entity ID: 19
MoleculeChainsSequence LengthOrganismDetailsImage
Actin-like protein ARP9g467Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: ARP9SWP59YMR033WYM9973.07
Find proteins for Q05123 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
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Entity ID: 20
MoleculeChainsLengthOrganismImage
DNA 167B167Homo sapiens
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Entity ID: 21
MoleculeChainsLengthOrganismImage
DNA 167N167Homo sapiens
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download CCD File 
H
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 10.1 Å
  • Aggregation State: CELL 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2020-09-09
    Type: Initial release