6KW5

The ClassC RSC-Nucleosome Complex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 10.1 Å
  • Aggregation State: CELL 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Structure of the RSC complex bound to the nucleosome

Ye, Y.P.Wu, H.Chen, K.J.Verma, N.Cairns, B.Gao, N.Chen, Z.C.

To be published.

Macromolecules

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Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Chromatin structure-remodeling complex subunit RSC7A [auth F]435Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: NPL6RSC7YMR091CYM9582.16C
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Entity ID: 2
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Chromatin structure-remodeling complex protein RSC8C [auth D], B [auth H]557Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: RSC8SWH3YFR037C
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Entity ID: 3
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Chromatin structure-remodeling complex subunit RSC9D [auth M]581Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: RSC9YML127WYM4987.08
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Entity ID: 4
MoleculeChainsSequence LengthOrganismDetailsImage
Chromatin structure-remodeling complex protein RSC6E [auth I]483Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: RSC6YCR052WYCR52W
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Entity ID: 5
MoleculeChainsSequence LengthOrganismDetailsImage
Chromatin structure-remodeling complex subunit SFH1F [auth G]426Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: SFH1YLR321CL8543.4
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Entity ID: 6
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Chromatin structure-remodeling complex protein RSC58G [auth A]502Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: RSC58YLR033W
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Entity ID: 7
MoleculeChainsSequence LengthOrganismDetailsImage
Nuclear protein STH1/NPS1H [auth J], AA [auth P], BA [auth Q]1359Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: STH1NPS1YIL126W
EC: 3.6.4.12
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Entity ID: 8
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High temperature lethal protein 1I [auth E]78Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: HTL1DRT1YCR020W-B
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Entity ID: 9
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Chromatin structure-remodeling complex protein RSC30J [auth C]883Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: RSC30YHR056C
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Entity ID: 10
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Chromatin structure-remodeling complex protein RSC3K885Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: RSC3YDR303CD9740.13
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Entity ID: 11
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Chromatin structure-remodeling complex subunit RSC4L [auth X]625Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: RSC4YKR008WYK107
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Entity ID: 12
MoleculeChainsSequence LengthOrganismDetailsImage
Chromatin structure-remodeling complex subunit RSC2M [auth L]889Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: RSC2YLR357WL9638.1
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Entity ID: 13
MoleculeChainsSequence LengthOrganismDetailsImage
Histone H4R [auth S], N [auth W]103Xenopus laevisMutation(s): 0 
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Entity ID: 14
MoleculeChainsSequence LengthOrganismDetailsImage
Actin-related protein 7O [auth f]477Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: ARP7SWP61YPR034WYP9367.14
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Entity ID: 15
MoleculeChainsSequence LengthOrganismDetailsImage
Regulator of Ty1 transposition protein 102P [auth h]157Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: RTT102YGR275WG9378
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Entity ID: 16
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Histone H3.2Q [auth R], T [auth V]136Xenopus laevisMutation(s): 0 
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Entity ID: 17
MoleculeChainsSequence LengthOrganismDetailsImage
Histone H2AU [auth O], S [auth T]130Xenopus laevisMutation(s): 0 
Gene Names: hist1h2ajLOC494591XELAEV_18003602mg
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Entity ID: 18
MoleculeChainsSequence LengthOrganismDetailsImage
Histone H4V [auth U], W [auth Y]126Xenopus laevisMutation(s): 0 
Gene Names: XELAEV_18028549mg
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Entity ID: 19
MoleculeChainsSequence LengthOrganismDetailsImage
Actin-like protein ARP9X [auth g]467Saccharomyces cerevisiae S288CMutation(s): 0 
Gene Names: ARP9SWP59YMR033WYM9973.07
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Entity ID: 20
MoleculeChainsLengthOrganismImage
DNA 167Y [auth B]167Homo sapiens
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Entity ID: 21
MoleculeChainsLengthOrganismImage
DNA 167Z [auth N]167Homo sapiens
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Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download Ideal Coordinates CCD File 
CA [auth H]ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 10.1 Å
  • Aggregation State: CELL 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2020-09-09
    Type: Initial release